RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 USP17L21D6R901 530 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ARHGAP6O43182 974 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 IGSF3O75054 1194 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 PLEKHA8P1O95397 391 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ZNF18P17022 549 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 BMP6P22004 513 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 HIBADHP31937 336 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 RPS8P62241 208 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 TROAPQ12815 778 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 SPTY2D1Q68D10 685 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 CTCFLQ8NI51 663 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 SPATA20Q8TB22 786 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 CELF1Q92879 486 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 PYM1Q9BRP8 204 aaKnown RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 L2HGDHQ9H9P8 463 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 ARPP21Q9UBL0 812 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 ZNF215Q9UL58 517 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 NFE2L3Q9Y4A8 694 aa9.2□□□□□ -0.94
GPC3-204ENST00000631057 V9GY48 417 aaPredicted RBP9.2□□□□□ -0.94
GPC3-204ENST00000631057 CDK5RAP2Q96SN8 1893 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 PHLPP2Q6ZVD8 1323 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TMEM232C9JQI7 657 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 KCNQ2O43526 872 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 PYGBP11216 843 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TRAPPC10P48553 1259 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 ETF1P62495 437 aaKnown RBP9.19□□□□□ -0.94
GPC3-204ENST00000631057 MECOMQ03112 1051 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 PDE4DQ08499 809 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TBX2Q13207 712 aaPredicted RBP9.19□□□□□ -0.94
GPC3-204ENST00000631057 SBK1Q52WX2 424 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TTC38Q5R3I4 469 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TBC1D9BQ66K14 1250 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 HOMER1Q86YM7 354 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 PDILTQ8N807 584 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
GPC3-204ENST00000631057 ZNF384Q8TF68 577 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 DHX58Q96C10 678 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
GPC3-204ENST00000631057 NARFQ9UHQ1 456 aa9.19□□□□□ -0.94
GPC3-204ENST00000631057 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 FAM205CA6NFA0 338 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 PRDM1O75626 825 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 KIF5BP33176 963 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 FMR1Q06787 632 aaKnown RBP eCLIP9.18□□□□□ -0.94
GPC3-204ENST00000631057 SPECC1LQ69YQ0 1117 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 SYT10Q6XYQ8 523 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
GPC3-204ENST00000631057 GRAMD1CQ8IYS0 662 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
GPC3-204ENST00000631057 SHISA4Q96DD7 197 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 GSDMAQ96QA5 445 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 SETDB2Q96T68 719 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 INTS13Q9NVM9 706 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 TRPC5Q9UL62 973 aaPredicted RBP9.18□□□□□ -0.94
GPC3-204ENST00000631057 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
GPC3-204ENST00000631057 WTIPA6NIX2 430 aaPredicted RBP9.17□□□□□ -0.94
GPC3-204ENST00000631057 SMIM22K7EJ46 135 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 TRIM66O15016 1216 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 STX10O60499 249 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 ZPR1O75312 459 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 RPS6KA4O75676 772 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 SCG2P13521 617 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 CALML3P27482 149 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 ATP2C1P98194 919 aaPredicted RBP9.17□□□□□ -0.94
GPC3-204ENST00000631057 ZNF827Q17R98 1081 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 CCDC178Q5BJE1 867 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 SPATA1Q5VX52 437 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 USP49Q70CQ1 688 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 BAG1Q99933 345 aaPredicted RBP9.17□□□□□ -0.94
GPC3-204ENST00000631057 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
GPC3-204ENST00000631057 OGFRQ9NZT2 677 aa9.17□□□□□ -0.94
GPC3-204ENST00000631057 A0A087X0B3 334 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 hCG_1642624A0A1W2PR95 340 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 ONECUT3O60422 494 aaPredicted RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 KLRK1P26718 216 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 NLRP5P59047 1200 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 CBX1P83916 185 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 DPYDQ12882 1025 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 NAA30Q147X3 362 aaPredicted RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 ZNF174Q15697 407 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 NPY5RQ15761 445 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 PFKFB3Q16875 520 aaPredicted RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 CCDC93Q567U6 631 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 EARS2Q5JPH6 523 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms