RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	JMY	Q8N9B5	988 aa		30.61	■■■□□ 2.49
UBE3A-222	ENST00000630907	GOPC	Q9HD26	462 aa		30.61	■■■□□ 2.49
UBE3A-222	ENST00000630907	AGTPBP1	Q9UPW5	1226 aa		30.61	■■■□□ 2.49
UBE3A-222	ENST00000630907	TNKS	O95271	1327 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	PTPRF	P10586	1907 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	TOP1	P11387	765 aa	Known RBP	30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	ANTXR2	P58335	489 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	TREML2	Q5T2D2	321 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	RCSD1	Q6JBY9	416 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	CHST3	Q7LGC8	479 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	FAM43A	Q8N2R8	423 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	TMEM47	Q9BQJ4	181 aa		30.6	■■■□□ 2.49
UBE3A-222	ENST00000630907	SART3	Q15020	963 aa	Known RBP	30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	ENAH	Q8N8S7	591 aa	Predicted RBP	30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	ANKS1A	Q92625	1134 aa		30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	LPAR1	Q92633	364 aa		30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	JAKMIP1	Q96N16	626 aa	Known RBP	30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	ZCCHC17	Q9NP64	241 aa	Known RBP	30.59	■■■□□ 2.49
UBE3A-222	ENST00000630907	ERICH2	A1L162	156 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907		F5H6K3	240 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	IFIT3	O14879	490 aa	Known RBP	30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	PRC1	O43663	620 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	RAD21	O60216	631 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	ALDH1A1	P00352	501 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	HMGB1	P09429	215 aa	Known RBP	30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	KLRC3	Q07444	240 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	KIAA1755	Q5JYT7	1200 aa		30.58	■■■□□ 2.49
UBE3A-222	ENST00000630907	PDHX	O00330	501 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	VCAM1	P19320	739 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	PSMA5	P28066	241 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	PABPC4	Q13310	644 aa	Known RBP eCLIP	30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	COL9A3	Q14050	684 aa	Predicted RBP	30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	DHX32	Q7L7V1	743 aa	Known RBP	30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	SPICE1	Q8N0Z3	855 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	GMCL1P1	Q8NEA9	526 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	MTA3	Q9BTC8	594 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	SLC45A1	Q9Y2W3	748 aa		30.57	■■■□□ 2.48
UBE3A-222	ENST00000630907	NDUFB10	O96000	172 aa		30.56	■■■□□ 2.48
UBE3A-222	ENST00000630907	SEC23A	Q15436	765 aa		30.56	■■■□□ 2.48
UBE3A-222	ENST00000630907	BEGAIN	Q9BUH8	593 aa		30.56	■■■□□ 2.48
UBE3A-222	ENST00000630907	RNF186	Q9NXI6	227 aa		30.56	■■■□□ 2.48
UBE3A-222	ENST00000630907	LOC285556	D6RIA3	1793 aa		30.56	■■■□□ 2.48
UBE3A-222	ENST00000630907	ANAPC15	P60006	121 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	TMEM67	Q5HYA8	995 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	IFIT1B	Q5T764	474 aa	Known RBP	30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	SLFN13	Q68D06	897 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	TMEM87B	Q96K49	555 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	RPAP3	Q9H6T3	665 aa	Predicted RBP	30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	KAT14	Q9H8E8	782 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	WBP1L	Q9NX94	342 aa		30.55	■■■□□ 2.48
UBE3A-222	ENST00000630907	MYH4	Q9Y623	1939 aa		30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	WDR46	O15213	610 aa	Known RBP	30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	HOXA7	P31268	230 aa	Predicted RBP	30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	EXOSC10	Q01780	885 aa	Known RBP	30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	WTAP	Q15007	396 aa		30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	BLOC1S2	Q6QNY1	142 aa		30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	IGDCC4	Q8TDY8	1250 aa		30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	BACH2	Q9BYV9	841 aa		30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	UPF2	Q9HAU5	1272 aa	Known RBP	30.54	■■■□□ 2.48
UBE3A-222	ENST00000630907	WDR19	Q8NEZ3	1342 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L15	C9J2P7	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L13	C9JLJ4	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L11	C9JVI0	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L18	D6R9N7	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L22	D6RA61	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L17	D6RBQ6	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L19	D6RCP7	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L20	D6RJB6	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	TRPA1	O75762	1119 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	OSBP	P22059	807 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	USP17L24	Q0WX57	530 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	TAF1C	Q15572	869 aa	Predicted RBP	30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	TM6SF1	Q9BZW5	370 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	PNMA3	Q9UL41	463 aa		30.53	■■■□□ 2.48
UBE3A-222	ENST00000630907	CAST	P20810	708 aa	Known RBP	30.52	■■■□□ 2.48
UBE3A-222	ENST00000630907	SH2B2	O14492	632 aa	Predicted RBP	30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	CA12	O43570	354 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	CPA1	P15085	419 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	IRX3	P78415	501 aa	Predicted RBP	30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	CATSPERG	Q6ZRH7	1159 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	PNMA1	Q8ND90	353 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	PARK7	Q99497	189 aa	Known RBP	30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	LRRC2	Q9BYS8	371 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	TANGO6	Q9C0B7	1094 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	ZFYVE28	Q9HCC9	887 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	SAGE1	Q9NXZ1	904 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	MTMR7	Q9Y216	660 aa		30.51	■■■□□ 2.47
UBE3A-222	ENST00000630907	RPS6KB1	P23443	525 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	FAM83B	Q5T0W9	1011 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	GMCL1	Q96IK5	515 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	TCEANC2	Q96MN5	208 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	NUP88	Q99567	741 aa	Predicted RBP	30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	C22orf23	Q9BZE7	217 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	ASCC2	Q9H1I8	757 aa	Predicted RBP	30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	LY9	Q9HBG7	655 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	ZSWIM6	Q9HCJ5	1215 aa		30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	GPHN	Q9NQX3	736 aa	Predicted RBP	30.5	■■■□□ 2.47
UBE3A-222	ENST00000630907	CYP2C8	P10632	490 aa		30.49	■■■□□ 2.47
UBE3A-222	ENST00000630907	BMP3	P12645	472 aa		30.49	■■■□□ 2.47
UBE3A-222	ENST00000630907	SLC1A4	P43007	532 aa		30.49	■■■□□ 2.47

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms