RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TEPSINQ96N21 525 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 ANO2Q9NQ90 1003 aa5.93□□□□□ -1.46
LINC00550-201ENST00000629293 ESPNB1AK53 854 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 IFIT1P09914 478 aaKnown RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 RARSP54136 660 aaKnown RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 LACTBP83111 547 aaPredicted RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 C8orf34Q49A92 452 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 ERO1BQ86YB8 467 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 ARMC5Q96C12 935 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 RNF208Q9H0X6 261 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 PCDHB9Q9Y5E1 797 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 MYH3P11055 1940 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 FAM205AQ6ZU69 1335 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 TLR2O60603 784 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 CYP2C8P10632 490 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 FXR1P51114 621 aaKnown RBP eCLIP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 MTMR3Q13615 1198 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 C15orf52Q6ZUT6 534 aaKnown RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 SNCAIPQ9Y6H5 919 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 LAMA2P24043 3122 aaKnown RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 MYO9BQ13459 2157 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 IRS2Q9Y4H2 1338 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 AK9Q5TCS8 1911 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 RNF40O75150 1001 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 SLURP2P0DP57 97 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 NFIAQ12857 509 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 COL19A1Q14993 1142 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 DCAF15Q66K64 600 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 GTF3C2Q8WUA4 911 aaPredicted RBP5.92□□□□□ -1.46
LINC00550-201ENST00000629293 TBC1D22AQ8WUA7 517 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 ABCF2Q9UG63 623 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 VCANP13611 3396 aa5.92□□□□□ -1.46
LINC00550-201ENST00000629293 IL16Q14005 1332 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 PDHXO00330 501 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 LGR5O75473 907 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 PRDX5P30044 214 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 PBX2P40425 430 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 PICALMQ13492 652 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 AAMPQ13685 434 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 GADL1Q6ZQY3 521 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 KAZALD1Q96I82 304 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 MROH5Q6ZUA9 1318 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 TK2O00142 265 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 ALDH1L1O75891 902 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 PDE8BO95263 885 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 GRK4P32298 578 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 FKBP1AP62942 108 aaKnown RBP5.91□□□□□ -1.46
LINC00550-201ENST00000629293 RAD51AP2Q09MP3 1159 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 CCDC102BQ68D86 513 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 APOBEC3HQ6NTF7 200 aaKnown RBP5.91□□□□□ -1.46
LINC00550-201ENST00000629293 SMCR8Q8TEV9 937 aaPredicted RBP5.91□□□□□ -1.46
LINC00550-201ENST00000629293 TRIM47Q96LD4 638 aa5.91□□□□□ -1.46
LINC00550-201ENST00000629293 COL1A1P02452 1464 aaPredicted RBP5.9□□□□□ -1.46
LINC00550-201ENST00000629293 TRIM75PA6NK02 468 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 CT47B1P0C2W7 299 aaPredicted RBP5.9□□□□□ -1.46
LINC00550-201ENST00000629293 ELNP15502 786 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 SEC13P55735 322 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 ZNF687Q8N1G0 1237 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 NUDT12Q9BQG2 462 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 ZNF341Q9BYN7 854 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 BCL11AQ9H165 835 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 USP40Q9NVE5 1235 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.9□□□□□ -1.46
LINC00550-201ENST00000629293 DCTN4Q9UJW0 460 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 ZHX2Q9Y6X8 837 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 PSME4Q14997 1843 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 SOWAHBA6NEL2 793 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 IGHDP01880 384 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 SLC5A1P13866 664 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 PRKCZQ05513 592 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 PUM3Q15397 648 aaKnown RBP5.9□□□□□ -1.46
LINC00550-201ENST00000629293 PANK1Q8TE04 598 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 HOOK2Q96ED9 719 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 DOLKQ9UPQ8 538 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 MYPNQ86TC9 1320 aa5.9□□□□□ -1.46
LINC00550-201ENST00000629293 NCOR1O75376 2440 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 LDHBP07195 334 aaKnown RBP5.9□□□□□ -1.47
LINC00550-201ENST00000629293 HOXD10P28358 340 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 PPIL2Q13356 520 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 TRIM50Q86XT4 487 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 RGL4Q8IZJ4 473 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 COL26A1Q96A83 441 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 ZDHHC15Q96MV8 337 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 UNC93B1Q9H1C4 597 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 PICK1Q9NRD5 415 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 SRRDQ9UH36 339 aa5.9□□□□□ -1.47
LINC00550-201ENST00000629293 LRRFIP2Q9Y608 721 aaKnown RBP5.9□□□□□ -1.47
LINC00550-201ENST00000629293 M0R2N6 131 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 P4HBP07237 508 aaKnown RBP5.89□□□□□ -1.47
LINC00550-201ENST00000629293 RLBP1P12271 317 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 CCL5P13501 91 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 CTGFP29279 349 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 ATP1A2P50993 1020 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 CDC42EP5Q6NZY7 148 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 ANKRD44Q8N8A2 993 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 SCUBE2Q9NQ36 999 aa5.89□□□□□ -1.47
LINC00550-201ENST00000629293 PA2G4Q9UQ80 394 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms