RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 MORF4L1Q9UBU8 362 aa13.24□□□□□ -0.29
DDX41-219ENST00000629036 RANBP2P49792 3224 aaKnown RBP13.24□□□□□ -0.29
DDX41-219ENST00000629036 PLXNA1Q9UIW2 1896 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 FRMPD3Q5JV73 1810 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 RAD50Q92878 1312 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
DDX41-219ENST00000629036 ORC4O43929 436 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 CNMDO75829 334 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 EEF2P13639 858 aaKnown RBP13.23□□□□□ -0.29
DDX41-219ENST00000629036 FAM110CQ1W6H9 321 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 P2RX7Q99572 595 aaKnown RBP13.23□□□□□ -0.29
DDX41-219ENST00000629036 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 LCTP09848 1927 aa13.23□□□□□ -0.29
DDX41-219ENST00000629036 HIP1O00291 1037 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 USP14P54578 494 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 HERVK_113P62684 666 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 CATSPERGQ6ZRH7 1159 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 CEP95Q96GE4 821 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 FEZ1Q99689 392 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 EFCC1Q9HA90 598 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 IL17RBQ9NRM6 502 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 TMOD4Q9NZQ9 345 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 NYAP2Q9P242 653 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 RBPJLQ9UBG7 517 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 PNMA3Q9UL41 463 aa13.22□□□□□ -0.29
DDX41-219ENST00000629036 NEDD4P46934 1319 aa13.21□□□□□ -0.29
DDX41-219ENST00000629036 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
DDX41-219ENST00000629036 SGSM2O43147 1006 aa13.21□□□□□ -0.29
DDX41-219ENST00000629036 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
DDX41-219ENST00000629036 ANKRD13CQ8N6S4 541 aa13.21□□□□□ -0.29
DDX41-219ENST00000629036 RPAP3Q9H6T3 665 aaPredicted RBP13.21□□□□□ -0.29
DDX41-219ENST00000629036 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
DDX41-219ENST00000629036 USP17L15C9J2P7 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L13C9JLJ4 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L11C9JVI0 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L18D6R9N7 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L22D6RA61 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L17D6RBQ6 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L19D6RCP7 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L20D6RJB6 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 OSBPP22059 807 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 GCLCP48506 637 aaPredicted RBP13.2□□□□□ -0.3
DDX41-219ENST00000629036 HAND2P61296 217 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 PTH1RQ03431 593 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 USP17L24Q0WX57 530 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 PABPC4Q13310 644 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX41-219ENST00000629036 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 SMCR8Q8TEV9 937 aaPredicted RBP13.2□□□□□ -0.3
DDX41-219ENST00000629036 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 LPAR1Q92633 364 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 MKL1Q969V6 931 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
DDX41-219ENST00000629036 MYH6P13533 1939 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
DDX41-219ENST00000629036 NMT2O60551 498 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 PSMC4P43686 418 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
DDX41-219ENST00000629036 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
DDX41-219ENST00000629036 PDE4BQ07343 736 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 BTBD7Q9P203 1132 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
DDX41-219ENST00000629036 SYNPO2Q9UMS6 1093 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
DDX41-219ENST00000629036 NDUFB10O96000 172 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 ERVK-9P63128 1117 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 ERVK-24P63145 666 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 TFAP4Q01664 338 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 Q3C1V9 767 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 SLC9C1Q4G0N8 1177 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 RCSD1Q6JBY9 416 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 REPS2Q8NFH8 660 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 PORCNQ9H237 461 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 ZNF287Q9HBT7 754 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 SRRDQ9UH36 339 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 MCM3APO60318 1980 aa13.18□□□□□ -0.3
DDX41-219ENST00000629036 MYPNQ86TC9 1320 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 GNRH1P01148 92 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 PRKCZQ05513 592 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 ZNF444Q8N0Y2 327 aaPredicted RBP13.17□□□□□ -0.3
DDX41-219ENST00000629036 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
DDX41-219ENST00000629036 GMCL1P1Q8NEA9 526 aa13.17□□□□□ -0.3
DDX41-219ENST00000629036 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms