RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	PRR13	Q9NZ81	148 aa		5.02	□□□□□ -1.61
CNOT1-223	ENST00000628857	SLC12A7	Q9Y666	1083 aa		5.02	□□□□□ -1.61
CNOT1-223	ENST00000628857	OAS3	Q9Y6K5	1087 aa	Known RBP	5.02	□□□□□ -1.61
CNOT1-223	ENST00000628857	ITIH2	P19823	946 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	ERCC5	P28715	1186 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	GIPR	P48546	466 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	BNIP3	Q12983	259 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	ANKRD39	Q53RE8	183 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	TP53INP2	Q8IXH6	220 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	SLC43A3	Q8NBI5	491 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZNF428	Q96B54	188 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	CCDC120	Q96HB5	630 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	CRBN	Q96SW2	442 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	ADGRE2	Q9UHX3	823 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	EFR3B	Q9Y2G0	817 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	INPP5F	Q9Y2H2	1132 aa		5.01	□□□□□ -1.61
CNOT1-223	ENST00000628857	CBX7	O95931	251 aa		5	□□□□□ -1.61
CNOT1-223	ENST00000628857	ATF4	P18848	351 aa	Predicted RBP	5	□□□□□ -1.61
CNOT1-223	ENST00000628857	GUCY2C	P25092	1073 aa		5	□□□□□ -1.61
CNOT1-223	ENST00000628857	CHMP4BP1	P59074	171 aa		5	□□□□□ -1.61
CNOT1-223	ENST00000628857	GAB4	Q2WGN9	574 aa		5	□□□□□ -1.61
CNOT1-223	ENST00000628857	SMARCC1	Q92922	1105 aa	Predicted RBP	5	□□□□□ -1.61
CNOT1-223	ENST00000628857	SRRT	Q9BXP5	876 aa	Known RBP	5	□□□□□ -1.61
CNOT1-223	ENST00000628857	ACBD3	Q9H3P7	528 aa		5	□□□□□ -1.61
CNOT1-223	ENST00000628857	CLEC3A	O75596	197 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	IRAK1	P51617	712 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	CASP7	P55210	303 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	EIF6	P56537	245 aa	Known RBP	4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	NBPF9	Q3BBW0	867 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	BBS9	Q3SYG4	887 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	ABI1	Q8IZP0	508 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	SLC9A7	Q96T83	725 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	GML	Q99445	158 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	ANTXR1	Q9H6X2	564 aa		4.99	□□□□□ -1.61
CNOT1-223	ENST00000628857	ACR	P10323	421 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	JUNB	P17275	347 aa	Predicted RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	PMS1	P54277	932 aa	Known RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	CDKAL1	Q5VV42	579 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	ATG4D	Q86TL0	474 aa	Predicted RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZNF655	Q8N720	491 aa	Predicted RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	DAGLB	Q8NCG7	672 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	PI4K2B	Q8TCG2	481 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	UBE2F	Q969M7	185 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	SHD	Q96IW2	340 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	CAPN10	Q9HC96	672 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	SUCO	Q9UBS9	1254 aa	Known RBP	4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857	PPT2	Q9UMR5	302 aa		4.98	□□□□□ -1.61
CNOT1-223	ENST00000628857		H3BS24	57 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	BIN1	O00499	593 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	NASP	P49321	788 aa	Predicted RBP	4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZP2	Q05996	745 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	IKZF1	Q13422	519 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	PLCL1	Q15111	1095 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZNF792	Q3KQV3	632 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZNF574	Q6ZN55	896 aa	Predicted RBP	4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	LSR	Q86X29	649 aa	Predicted RBP	4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	TMEM192	Q8IY95	271 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	PHAX	Q9H814	394 aa	Known RBP	4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ATP13A1	Q9HD20	1204 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	MBNL3	Q9NUK0	354 aa	Known RBP	4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZSWIM5	Q9P217	1185 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857	ZNF281	Q9Y2X9	895 aa		4.97	□□□□□ -1.61
CNOT1-223	ENST00000628857		A0A087WZG4	1122 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	ESR1	P03372	595 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	ITGB5	P18084	799 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	TPP2	P29144	1249 aa	Predicted RBP	4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	UNC5A	Q6ZN44	842 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	SLC6A18	Q96N87	628 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	TINF2	Q9BSI4	451 aa		4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	ZNF214	Q9UL59	606 aa	Predicted RBP	4.96	□□□□□ -1.62
CNOT1-223	ENST00000628857	LRRN2	O75325	713 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	RNASE1	P07998	156 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	ENDOU	P21128	410 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	POLR2B	P30876	1174 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	GDNF	P39905	211 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	ARID5A	Q03989	594 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	NMI	Q13287	307 aa	Predicted RBP	4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	AUH	Q13825	339 aa	Known RBP	4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	FBXW10	Q5XX13	1052 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	MCTP1	Q6DN14	999 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	C7orf61	Q8IZ16	206 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	LINC00116	Q8NCU8	138 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	FLAD1	Q8NFF5	587 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	CPLX3	Q8WVH0	158 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	HDAC8	Q9BY41	377 aa		4.95	□□□□□ -1.62
CNOT1-223	ENST00000628857	SIGLEC6	O43699	453 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	CD96	P40200	585 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	ZC3H6	P61129	1189 aa	Known RBP	4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	CLEC16A	Q2KHT3	1053 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	TNNI3K	Q59H18	835 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	RNF111	Q6ZNA4	994 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	TTC6	Q86TZ1	520 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	DHX38	Q92620	1227 aa	Known RBP	4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	C8orf37	Q96NL8	207 aa		4.94	□□□□□ -1.62
CNOT1-223	ENST00000628857	ALPK1	Q96QP1	1244 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms