RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
LINC01943-202ENST00000628090 BAG4O95429 457 aaKnown RBP11.79□□□□□ -0.52
LINC01943-202ENST00000628090 F13A1P00488 732 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 XBP1P17861 261 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 SSRP1Q08945 709 aaKnown RBP11.79□□□□□ -0.52
LINC01943-202ENST00000628090 RASA3Q14644 834 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 SPRYD7Q5W111 196 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 APOA5Q6Q788 366 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 KAT14Q9H8E8 782 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 ZNF70Q9UC06 446 aaPredicted RBP11.79□□□□□ -0.52
LINC01943-202ENST00000628090 TNKSO95271 1327 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 CENPFP49454 3210 aa11.79□□□□□ -0.52
LINC01943-202ENST00000628090 DDAH1O94760 285 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 KIF5BP33176 963 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 RGS19P49795 217 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 PICALMQ13492 652 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 RTN1Q16799 776 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 DGKHQ86XP1 1220 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 NSUN7Q8NE18 718 aaKnown RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 DDX11Q96FC9 970 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 TCP11L1Q9NUJ3 509 aa11.78□□□□□ -0.52
LINC01943-202ENST00000628090 SAP30BPQ9UHR5 308 aaKnown RBP11.78□□□□□ -0.52
LINC01943-202ENST00000628090 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 GJA5P36382 358 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 GNAQP50148 359 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 CACNB3P54284 484 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 RHBDL3P58872 404 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 TFAP4Q01664 338 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 FOXD4L5Q5VV16 416 aaPredicted RBP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 CDC42EP5Q6NZY7 148 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 C16orf86Q6ZW13 317 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 ZSCAN29Q8IWY8 852 aaPredicted RBP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 ZNF654Q8IZM8 581 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 ZKSCAN3Q9BRR0 538 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 RBM27Q9P2N5 1060 aaKnown RBP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 ORC3Q9UBD5 711 aaPredicted RBP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 BRPF3Q9ULD4 1205 aa11.77□□□□□ -0.53
LINC01943-202ENST00000628090 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC01943-202ENST00000628090 ENTPD3O75355 529 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 PRDM1O75626 825 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 CDK8P49336 464 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 KRT85P78386 507 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 SAFBQ15424 915 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01943-202ENST00000628090 SUPT20HL1Q3ZLR7 823 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 ATL3Q6DD88 541 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
LINC01943-202ENST00000628090 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 SYAP1Q96A49 352 aaPredicted RBP11.76□□□□□ -0.53
LINC01943-202ENST00000628090 ZNF396Q96N95 335 aaPredicted RBP11.76□□□□□ -0.53
LINC01943-202ENST00000628090 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 OSBPL5Q9H0X9 879 aaPredicted RBP11.76□□□□□ -0.53
LINC01943-202ENST00000628090 INCENPQ9NQS7 918 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 SERPINB13Q9UIV8 391 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 STK36Q9NRP7 1315 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 NID2Q14112 1375 aa11.76□□□□□ -0.53
LINC01943-202ENST00000628090 GPR25O00155 361 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 IGF2BP3O00425 579 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 TRAK2O60296 914 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 MBD3O95983 291 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 CYP2D6P10635 497 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 TNNI2P48788 182 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 SOX10P56693 466 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 ENAHQ8N8S7 591 aaPredicted RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 CCDC17Q96LX7 622 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 EHD4Q9H223 541 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 NCOA5Q9HCD5 579 aaKnown RBP11.75□□□□□ -0.53
LINC01943-202ENST00000628090 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 MTMR6Q9Y217 621 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 PPP2R3BQ9Y5P8 575 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 MYH6P13533 1939 aa11.75□□□□□ -0.53
LINC01943-202ENST00000628090 DDX60LQ5H9U9 1706 aaKnown RBP11.74□□□□□ -0.53
LINC01943-202ENST00000628090 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 JAK2O60674 1132 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 DEXIO95424 95 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
LINC01943-202ENST00000628090 IFNAR1P17181 557 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms