RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 DNAJC18Q9H819 358 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
TCF4-260ENST00000627685 PHIPQ8WWQ0 1821 aa9.38□□□□□ -0.91
TCF4-260ENST00000627685 MYH2Q9UKX2 1941 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 TCRBV5S4A2TA0A5A2 114 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 SIAH2O43255 324 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 VARSP26640 1264 aaKnown RBP9.37□□□□□ -0.91
TCF4-260ENST00000627685 INPP5BP32019 993 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 BTDP43251 543 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 RGS3P49796 1198 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 INHBEP58166 350 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 JAG1P78504 1218 aa9.37□□□□□ -0.91
TCF4-260ENST00000627685 EDC3Q96F86 508 aaKnown RBP9.37□□□□□ -0.91
TCF4-260ENST00000627685 ADGRA2Q96PE1 1338 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 ENTPD3O75355 529 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 ZBTB48P10074 688 aaPredicted RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 TNNI2P48788 182 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 SREBF2Q12772 1141 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 TCP10Q12799 353 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 SHROOM1Q2M3G4 852 aaPredicted RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 NOL9Q5SY16 702 aaKnown RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 BRI3BPQ8WY22 251 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 USP40Q9NVE5 1235 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.36□□□□□ -0.91
TCF4-260ENST00000627685 ABCF2Q9UG63 623 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 DOCK1Q14185 1865 aa9.36□□□□□ -0.91
TCF4-260ENST00000627685 ZSWIM8A7E2V4 1837 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 FAM196BA6NMK8 535 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 TRPA1O75762 1119 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 NR6A1Q15406 480 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 AACSQ86V21 672 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
TCF4-260ENST00000627685 ANKRD13AQ8IZ07 590 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
TCF4-260ENST00000627685 OTUD7AQ8TE49 926 aaPredicted RBP9.35□□□□□ -0.91
TCF4-260ENST00000627685 SH3RF3Q8TEJ3 882 aaPredicted RBP9.35□□□□□ -0.91
TCF4-260ENST00000627685 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
TCF4-260ENST00000627685 OPTNQ96CV9 577 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 LOC285556D6RIA3 1793 aa9.35□□□□□ -0.91
TCF4-260ENST00000627685 FLT1P17948 1338 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 MANSC4A6NHS7 340 aaPredicted RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 SMIM22K7EJ46 135 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 AXIN1O15169 862 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 SMARCA5O60264 1052 aaPredicted RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 AVPP01185 164 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 TTC39AQ5SRH9 613 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 ERICH6Q7L0X2 663 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 BPHLQ86WA6 291 aaPredicted RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 DZIP1Q86YF9 867 aaKnown RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 ERC1Q8IUD2 1116 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.34□□□□□ -0.91
TCF4-260ENST00000627685 HPS1Q92902 700 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 HOOK2Q96ED9 719 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 ABHD8Q96I13 439 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 WRNIP1Q96S55 665 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 OSBPL5Q9H0X9 879 aaPredicted RBP9.34□□□□□ -0.91
TCF4-260ENST00000627685 TMOD2Q9NZR1 351 aa9.34□□□□□ -0.91
TCF4-260ENST00000627685 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 OS9Q13438 667 aaPredicted RBP9.33□□□□□ -0.92
TCF4-260ENST00000627685 TMEM259Q4ZIN3 620 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
TCF4-260ENST00000627685 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 PI4K2BQ8TCG2 481 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 YTHDC1Q96MU7 727 aaKnown RBP9.33□□□□□ -0.92
TCF4-260ENST00000627685 MCOLN1Q9GZU1 580 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 PTPRFP10586 1907 aa9.33□□□□□ -0.92
TCF4-260ENST00000627685 IGSF3O75054 1194 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 TBC1D8O95759 1140 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 ATP5JP18859 108 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 PPIL2Q13356 520 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 ARID5BQ14865 1188 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 SPTY2D1Q68D10 685 aaPredicted RBP9.32□□□□□ -0.92
TCF4-260ENST00000627685 ZNF787Q6DD87 383 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 GPAT2Q6NUI2 795 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
TCF4-260ENST00000627685 HAUS7Q99871 368 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 AATFQ9NY61 560 aaKnown RBP eCLIP9.32□□□□□ -0.92
TCF4-260ENST00000627685 NAV1Q8NEY1 1877 aa9.32□□□□□ -0.92
TCF4-260ENST00000627685 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
TCF4-260ENST00000627685 GPR25O00155 361 aa9.31□□□□□ -0.92
TCF4-260ENST00000627685 APBB1O00213 710 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms