RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 KIAA1468Q9P260 1216 aa22.58■■□□□ 1.21
CHRNA4-209ENST00000627000 FBXO2Q9UK22 296 aaPredicted RBP22.58■■□□□ 1.21
CHRNA4-209ENST00000627000 WNT7AO00755 349 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 IQCB1Q15051 598 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 TNFRSF25Q93038 417 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 USP40Q9NVE5 1235 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 SCN9AQ15858 1988 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 FAM237AA0A1B0GTK4 181 aa22.57■■□□□ 1.2
CHRNA4-209ENST00000627000 PTPREP23469 700 aa22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 ANO10Q9NW15 660 aa22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 GOLGA8HP0CJ92 632 aa22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 GPKOWQ92917 476 aaPredicted RBP eCLIP22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 CEP95Q96GE4 821 aa22.56■■□□□ 1.2
CHRNA4-209ENST00000627000 CYTH3O43739 400 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 MSNP26038 577 aaKnown RBP22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 NLRP5P59047 1200 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 APOBEC3HQ6NTF7 200 aaKnown RBP22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 CDC42EP5Q6NZY7 148 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 BRMS1Q9HCU9 246 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 ZKSCAN5Q9Y2L8 839 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 PCDHAC2Q9Y5I4 1007 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 CAVIN2O95810 425 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 TEKT1Q969V4 418 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 TIGD1Q96MW7 591 aa22.55■■□□□ 1.2
CHRNA4-209ENST00000627000 BIN1O00499 593 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 ECE2O60344 883 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 GABPAQ06546 454 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 HHIPL2Q6UWX4 724 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 KIAA0825Q8IV33 1275 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 CPVLQ9H3G5 476 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 KCNH3Q9ULD8 1083 aa22.54■■□□□ 1.2
CHRNA4-209ENST00000627000 PALM3A6NDB9 673 aaPredicted RBP22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 TRIM75PA6NK02 468 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 CRKP46108 304 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 LONRF3Q496Y0 759 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 DPCR1Q3MIW9 517 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 TYW1BQ6NUM6 668 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 C7orf43Q8WVR3 580 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 CNKSR1Q969H4 720 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 ZNF830Q96NB3 372 aaPredicted RBP22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 CEP131Q9UPN4 1083 aa22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.53■■□□□ 1.2
CHRNA4-209ENST00000627000 ZNF646O15015 1829 aaPredicted RBP22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 MYH8P13535 1937 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 GNAQP50148 359 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 NFIAQ12857 509 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 AOC3Q16853 763 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 DHX40Q8IX18 779 aaKnown RBP22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 SRPRBQ9Y5M8 271 aaKnown RBP22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 SLURP2P0DP57 97 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 DACT2Q5SW24 774 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 SPC24Q8NBT2 197 aa22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 OSBPL5Q9H0X9 879 aaPredicted RBP22.52■■□□□ 1.2
CHRNA4-209ENST00000627000 AKR1B1P15121 316 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 PNOCQ13519 176 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 ZNF174Q15697 407 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 ISM2Q6H9L7 571 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 USP17L2Q6R6M4 530 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 PIK3AP1Q6ZUJ8 805 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 USP49Q70CQ1 688 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 CEP57L1Q8IYX8 460 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 CSRNP2Q9H175 543 aa22.51■■□□□ 1.19
CHRNA4-209ENST00000627000 KLRF2D3W0D1 207 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 TOP1P11387 765 aaKnown RBP22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 KRBA2Q6ZNG9 492 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 CLEC10AQ8IUN9 316 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 ZFPM1Q8IX07 1006 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 GOLGA6L19H0YKK7 550 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 NOVP48745 357 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 CACNB3P54284 484 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 TTC38Q5R3I4 469 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 WWC2Q6AWC2 1192 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 DEFB132Q7Z7B7 95 aa22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 METTL16Q86W50 562 aaKnown RBP22.5■■□□□ 1.19
CHRNA4-209ENST00000627000 FOXN1O15353 648 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 AOPEPQ8N6M6 819 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 ZNF579Q8NAF0 562 aaKnown RBP22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 CNNM3Q8NE01 707 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 TRIM5Q9C035 493 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 FAM13BQ9NYF5 915 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 SERPINB13Q9UIV8 391 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 EIF6P56537 245 aaKnown RBP22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 NLRP12P59046 1061 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 ZRSR1Q15695 479 aaKnown RBP22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 BLIDQ8IZY5 108 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 RASGRP4Q8TDF6 673 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 ZDHHC15Q96MV8 337 aa22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 TTC12Q9H892 705 aaPredicted RBP22.49■■□□□ 1.19
CHRNA4-209ENST00000627000 PLIN4Q96Q06 1357 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 BECN2A8MW95 431 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 PARP1P09874 1014 aaKnown RBP22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 ZNF75DP51815 510 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 HEATR3Q7Z4Q2 680 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 PLA2G4DQ86XP0 818 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 UBE2Q2Q8WVN8 375 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 SH3GLB2Q9NR46 395 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 MTMR4Q9NYA4 1195 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms