RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 ADD3Q9UEY8 706 aaKnown RBP12.8□□□□□ -0.36
VARS2-213ENST00000625423 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 BMP15O95972 392 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 PANX2Q96RD6 677 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 BLZF1Q9H2G9 400 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 CNTNAP5Q8WYK1 1306 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 SEC31AO94979 1220 aaKnown RBP12.79□□□□□ -0.36
VARS2-213ENST00000625423 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.361e-7■■■■■ 34.2
VARS2-213ENST00000625423 FGRP09769 529 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 PPP2R3AQ06190 1150 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
VARS2-213ENST00000625423 CDKAL1Q5VV42 579 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 RAD9BQ6WBX8 426 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
VARS2-213ENST00000625423 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
VARS2-213ENST00000625423 DDAH1O94760 285 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 PIK3AP1Q6ZUJ8 805 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 CTCFLQ8NI51 663 aaPredicted RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 CTNND2Q9UQB3 1225 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 A0A0U1RQJ8 604 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 CCDC175P0C221 793 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 KLRK1P26718 216 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 PBX1P40424 430 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 TEX35Q5T0J7 233 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 ATRIPQ8WXE1 791 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 XDHP47989 1333 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 NLRP5P59047 1200 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
VARS2-213ENST00000625423 MYH2Q9UKX2 1941 aa12.78□□□□□ -0.36
VARS2-213ENST00000625423 PHLPP1O60346 1717 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 TPM1P09493 284 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 CASP14P31944 242 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 MCM7P33993 719 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.36
VARS2-213ENST00000625423 CTAGE1Q96RT6 745 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.36
VARS2-213ENST00000625423 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.36
VARS2-213ENST00000625423 MYH6P13533 1939 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 CACNA1SQ13698 1873 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
VARS2-213ENST00000625423 CCT6AP40227 531 aaKnown RBP12.77□□□□□ -0.37
VARS2-213ENST00000625423 MECOMQ03112 1051 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
VARS2-213ENST00000625423 MFAP3LO75121 409 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 CYP2D6P10635 497 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 SCG2P13521 617 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 E2F4Q16254 413 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 IL17AQ16552 155 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 IQUBQ8NA54 791 aa12.77□□□□□ -0.37
VARS2-213ENST00000625423 DCP1AQ9NPI6 582 aaPredicted RBP12.77□□□□□ -0.37
VARS2-213ENST00000625423 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
VARS2-213ENST00000625423 RRAGBQ5VZM2 374 aa12.76□□□□□ -0.37
VARS2-213ENST00000625423 MTRQ99707 1265 aa12.76□□□□□ -0.37
VARS2-213ENST00000625423 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 GYPCP04921 128 aa12.76□□□□□ -0.37
VARS2-213ENST00000625423 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
VARS2-213ENST00000625423 RSRC2Q7L4I2 434 aaKnown RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 GPR161Q8N6U8 529 aaKnown RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 NAA15Q9BXJ9 866 aaKnown RBP12.76□□□□□ -0.37
VARS2-213ENST00000625423 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
VARS2-213ENST00000625423 SEMA3EO15041 775 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 ORC4O43929 436 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 PDXDC2PQ6P474 469 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 SMIM5Q71RC9 77 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
VARS2-213ENST00000625423 KCNQ2O43526 872 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 PRDX5P30044 214 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 CDC25AP30304 524 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 KRT31Q15323 416 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 CRNKL1Q9BZJ0 848 aaKnown RBP12.75□□□□□ -0.37
VARS2-213ENST00000625423 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 BAZ2BQ9UIF8 2168 aaKnown RBP12.75□□□□□ -0.37
VARS2-213ENST00000625423 TSPY2A6NKD2 308 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 KCNQ4P56696 695 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
VARS2-213ENST00000625423 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
VARS2-213ENST00000625423 CLEC4GQ6UXB4 293 aa12.75□□□□□ -0.37
VARS2-213ENST00000625423 VPS16Q9H269 839 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms