RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 CEP135Q66GS9 1140 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 TRPM4Q8TD43 1214 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
ATRX-213ENST00000624032 SPATA32Q96LK8 384 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 CLSTN2Q9H4D0 955 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
ATRX-213ENST00000624032 GPRC5DQ9NZD1 345 aa13.32□□□□□ -0.28
ATRX-213ENST00000624032 CNTNAP1P78357 1384 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 WDR19Q8NEZ3 1342 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 PDIA3P30101 505 aaKnown RBP13.31□□□□□ -0.28
ATRX-213ENST00000624032 ZNF165P49910 485 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 KIF4BQ2VIQ3 1234 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 UBAC1Q9BSL1 405 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 TNKSO95271 1327 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 SLFN14P0C7P3 912 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 GABPAQ06546 454 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 NFXL1Q6ZNB6 911 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
ATRX-213ENST00000624032 TMEM87BQ96K49 555 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
ATRX-213ENST00000624032 SERPINB13Q9UIV8 391 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 H7C1D1 291 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 MYO1BO43795 1136 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 HLA-DOAP06340 250 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 PCP11498 1178 aaKnown RBP13.31□□□□□ -0.28
ATRX-213ENST00000624032 CDC25BP30305 580 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 SCRN1Q12765 414 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 ENAHQ8N8S7 591 aaPredicted RBP13.31□□□□□ -0.28
ATRX-213ENST00000624032 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 DNAJC18Q9H819 358 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 IL17RBQ9NRM6 502 aa13.31□□□□□ -0.28
ATRX-213ENST00000624032 ENTPD3O75355 529 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 CAVIN2O95810 425 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 WTAPQ15007 396 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 SHROOM1Q2M3G4 852 aaPredicted RBP13.3□□□□□ -0.28
ATRX-213ENST00000624032 KRT222Q8N1A0 295 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 FBXL16Q8N461 479 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 ZNF397Q8NF99 534 aaPredicted RBP13.3□□□□□ -0.28
ATRX-213ENST00000624032 GOLGA8BA8MQT2 603 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 NEMFO60524 1076 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 SHMT1P34896 483 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 SEC23AQ15436 765 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
ATRX-213ENST00000624032 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 DNAJC25Q9H1X3 360 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 HPS5Q9UPZ3 1129 aa13.3□□□□□ -0.28
ATRX-213ENST00000624032 GRIN3BO60391 1043 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 HIRAP54198 1017 aaPredicted RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 LEO1Q8WVC0 666 aaPredicted RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 PFKFB2O60825 505 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 AKR1B1P15121 316 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 CCDC144BQ3MJ40 725 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 FAM151AQ8WW52 585 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 GTF3C6Q969F1 213 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
ATRX-213ENST00000624032 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
ATRX-213ENST00000624032 ERICH2A1L162 156 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 EVCP57679 992 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 TERF2Q15554 542 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 CLEC10AQ8IUN9 316 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 ZNF274Q96GC6 653 aaPredicted RBP13.28□□□□□ -0.28
ATRX-213ENST00000624032 CCDC69A6NI79 296 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 JAK2O60674 1132 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 LIFRP42702 1097 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 RASA3Q14644 834 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 APOA5Q6Q788 366 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 NR1I2O75469 434 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 PTPN14Q15678 1187 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 MIGA2Q7L4E1 593 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
ATRX-213ENST00000624032 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATRX-213ENST00000624032 MYH8P13535 1937 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 CCDC66A2RUB6 948 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 IFIT1BQ5T764 474 aaKnown RBP13.27□□□□□ -0.28
ATRX-213ENST00000624032 ANGEL2Q5VTE6 544 aaKnown RBP13.27□□□□□ -0.28
ATRX-213ENST00000624032 PRAMEF18Q5VWM3 479 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 SGMS1Q86VZ5 419 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 EHD4Q9H223 541 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 ZNF215Q9UL58 517 aaPredicted RBP13.27□□□□□ -0.28
ATRX-213ENST00000624032 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 ATRNL1Q5VV63 1379 aa13.27□□□□□ -0.28
ATRX-213ENST00000624032 CTDNEP1O95476 244 aa13.27□□□□□ -0.29
ATRX-213ENST00000624032 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms