RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 NPY5RQ15761 445 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 RTKN2Q8IZC4 609 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 RNF214Q8ND24 703 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 PIBF1Q8WXW3 757 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 ARID3AQ99856 593 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 GTPBP4Q9BZE4 634 aaKnown RBP21.29■■□□□ 1
PCDHB2-202ENST00000622947 FAM198AQ9UFP1 575 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 MTMR7Q9Y216 660 aa21.29■■□□□ 1
PCDHB2-202ENST00000622947 SPTLC2O15270 562 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
PCDHB2-202ENST00000622947 AKAP17AQ02040 695 aaKnown RBP21.28■■□□□ 1
PCDHB2-202ENST00000622947 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
PCDHB2-202ENST00000622947 GRM4Q14833 912 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 CCDC125Q86Z20 511 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 PHF20Q9BVI0 1012 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 NUP62CLQ9H1M0 184 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 LETM1O95202 739 aaPredicted RBP21.28■■□□□ 1
PCDHB2-202ENST00000622947 AKR1B1P15121 316 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 SHMT1P34896 483 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 TCP10Q12799 353 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 ENGASEQ8NFI3 743 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 FOXP1Q9H334 677 aaPredicted RBP21.28■■□□□ 1
PCDHB2-202ENST00000622947 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 SERPINA10Q9UK55 444 aa21.28■■□□□ 1
PCDHB2-202ENST00000622947 SLC39A14Q15043 492 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 CCDC178Q5BJE1 867 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 EARS2Q5JPH6 523 aaKnown RBP21.27■■□□□ 1
PCDHB2-202ENST00000622947 AXDND1Q5T1B0 1012 aaPredicted RBP21.27■■□□□ 1
PCDHB2-202ENST00000622947 ADALQ6DHV7 355 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 SH3BP5LQ7L8J4 393 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 CLEC10AQ8IUN9 316 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 CLSTN2Q9H4D0 955 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 DNAJC18Q9H819 358 aa21.27■■□□□ 1
PCDHB2-202ENST00000622947 BRCA1P38398 1863 aaKnown RBP21.27■■□□□ 1
PCDHB2-202ENST00000622947 ADAMTS3O15072 1205 aa21.27■□□□□ 0.99
PCDHB2-202ENST00000622947 CYTH3O43739 400 aa21.27■□□□□ 0.99
PCDHB2-202ENST00000622947 KCNG4Q8TDN1 519 aa21.27■□□□□ 0.99
PCDHB2-202ENST00000622947 DDX19AQ9NUU7 478 aaKnown RBP21.27■□□□□ 0.99
PCDHB2-202ENST00000622947 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 DDTLA6NHG4 134 aaPredicted RBP21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 RAD17O75943 681 aa21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 KIF20AO95235 890 aa21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 MARCKSP29966 332 aaPredicted RBP21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 KIF5BP33176 963 aa21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 PRMT6Q96LA8 375 aaPredicted RBP21.26■□□□□ 0.99
PCDHB2-202ENST00000622947 PLIN4Q96Q06 1357 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 PALM3A6NDB9 673 aaPredicted RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 GOLGA8HP0CJ92 632 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 SAFBQ15424 915 aaKnown RBP eCLIP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 NOM1Q5C9Z4 860 aaKnown RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 RBM43Q6ZSC3 357 aaKnown RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 CKAP2LQ8IYA6 745 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 IDI2Q9BXS1 227 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 CPVLQ9H3G5 476 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 IGKV6D-41A0A0C4DH26 115 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 PFKFB3Q16875 520 aaPredicted RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 GRIPAP1Q4V328 841 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 LARGE2Q8N3Y3 721 aa21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 BBXQ8WY36 941 aaPredicted RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 TDRD3Q9H7E2 651 aaKnown RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 GREB1LQ9C091 1923 aaPredicted RBP21.25■□□□□ 0.99
PCDHB2-202ENST00000622947 A0A1B0GVL5 298 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 PSMD14O00487 310 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 SCG2P13521 617 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 MTFR1LQ9H019 292 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 TNMDQ9H2S6 317 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 MTMR4Q9NYA4 1195 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 A0A1W2PQ27 194 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 A0A1W2PQ64 194 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 A0A1W2PQD8 194 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 TGFB2P61812 414 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 MAP3K11Q16584 847 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 GMLQ99445 158 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
PCDHB2-202ENST00000622947 NDUFA8P51970 172 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 SHROOM1Q2M3G4 852 aaPredicted RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 USP17L2Q6R6M4 530 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 FMR1NBQ8N0W7 255 aaPredicted RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 TNFRSF25Q93038 417 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 CABP5Q9NP86 173 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 CCDC39Q9UFE4 941 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 ZBTB12Q9Y330 459 aaPredicted RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 VIL1P09327 827 aaKnown RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 TOP1P11387 765 aaKnown RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 EIF6P56537 245 aaKnown RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 FAM160A1Q05DH4 1040 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 PPP4R3BQ5MIZ7 849 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 RSBN1LQ6PCB5 846 aaPredicted RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 MRPS27Q92552 414 aaKnown RBP21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 PCDHB6Q9Y5E3 794 aa21.23■□□□□ 0.99
PCDHB2-202ENST00000622947 FER1L6Q2WGJ9 1857 aa21.22■□□□□ 0.99
PCDHB2-202ENST00000622947 WNT7AO00755 349 aa21.22■□□□□ 0.99
PCDHB2-202ENST00000622947 SWAP70Q9UH65 585 aa21.22■□□□□ 0.99
PCDHB2-202ENST00000622947 GPKOWQ92917 476 aaPredicted RBP eCLIP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms