RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	CCDC174	Q6PII3	467 aa		12.71	□□□□□ -0.37
RRP12-215	ENST00000622320	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.71	□□□□□ -0.37
RRP12-215	ENST00000622320	NSUN4	Q96CB9	384 aa	Known RBP	12.71	□□□□□ -0.37
RRP12-215	ENST00000622320	FAM86C2P	A6NEL3	165 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	DCDC2C	A8MYV0	355 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	LDHC	P07864	332 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	PPIG	Q13427	754 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	TMEM240	Q5SV17	173 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	PRAMEF19	Q5SWL8	479 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	CATSPERG	Q6ZRH7	1159 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	ANKRD33	Q7Z3H0	272 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	RNF180	Q86T96	592 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	SSH1	Q8WYL5	1049 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	NKX2-4	Q9H2Z4	354 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	C11orf16	Q9NQ32	467 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	MSRA	Q9UJ68	235 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	TBX21	Q9UL17	535 aa		12.7	□□□□□ -0.38
RRP12-215	ENST00000622320	FLT1	P17948	1338 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	PGK1	P00558	417 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	TIMP1	P01033	207 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	GH2	P01242	217 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	RARB	P10826	455 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	METTL16	Q86W50	562 aa	Known RBP	12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	USP44	Q9H0E7	712 aa		12.69	□□□□□ -0.38
RRP12-215	ENST00000622320	PTPRC	P08575	1304 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	XIRP2	A4UGR9	3374 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	ERC2	O15083	957 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	GPR37L1	O60883	481 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	COBL	O75128	1261 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	IL15	P40933	162 aa	Predicted RBP	12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	MRE11	P49959	708 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	USP14	P54578	494 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	SKIV2L	Q15477	1246 aa	Known RBP	12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	MFSD5	Q6N075	450 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	PI16	Q6UXB8	463 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	C16orf59	Q7L2K0	433 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	MAPKAPK5	Q8IW41	473 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	TOX2	Q96NM4	488 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	NOL10	Q9BSC4	688 aa	Known RBP	12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	KIAA1683	Q9H0B3	1180 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	SLC28A3	Q9HAS3	691 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	RAI14	Q9P0K7	980 aa		12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	YBX2	Q9Y2T7	364 aa	Known RBP	12.68	□□□□□ -0.38
RRP12-215	ENST00000622320	APBB1	O00213	710 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	STRN	O43815	780 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	CSF2RA	P15509	400 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	ERCC3	P19447	782 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	RARS	P54136	660 aa	Known RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	MVP	Q14764	893 aa	Known RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	SHCBP1	Q8NEM2	672 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	TGFBRAP1	Q8WUH2	860 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	LENG1	Q96BZ8	264 aa	Predicted RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	MAML3	Q96JK9	1138 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	STARD7	Q9NQZ5	370 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	SLC5A4	Q9NY91	659 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	HMG20B	Q9P0W2	317 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	PALD1	Q9ULE6	856 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	PA2G4	Q9UQ80	394 aa	Known RBP	12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	CHD7	Q9P2D1	2997 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	SMCHD1	A6NHR9	2005 aa		12.67	□□□□□ -0.38
RRP12-215	ENST00000622320	REV3L	O60673	3130 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	MYH1	P12882	1939 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320		A0A1B0GUL7	405 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	ACR	P10323	421 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	TBC1D9	Q6ZT07	1266 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	ZNF365	Q70YC5	407 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	HERVK_113	Q902F9	699 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	SPATC1L	Q9H0A9	340 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	NRBP1	Q9UHY1	535 aa		12.66	□□□□□ -0.38
RRP12-215	ENST00000622320	MROH7	Q68CQ1	1323 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	ADAMTS4	O75173	837 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	HLA-DOA	P06340	250 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	PLCG2	P16885	1265 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	ACLY	P53396	1101 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	TIMM10	P62072	90 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	PPP2R2D	Q66LE6	453 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	TMEM199	Q8N511	208 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	SPATA5	Q8NB90	893 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	ACER1	Q8TDN7	264 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	XAGE2	Q96GT9	111 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	PPP1R12C	Q9BZL4	782 aa		12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	MTIF3	Q9H2K0	278 aa	Known RBP	12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	SAP30BP	Q9UHR5	308 aa	Known RBP	12.65	□□□□□ -0.38
RRP12-215	ENST00000622320	PARP14	Q460N5	1801 aa		12.65	□□□□□ -0.39
RRP12-215	ENST00000622320	SYNRG	Q9UMZ2	1314 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	COL4A4	P53420	1690 aa	Predicted RBP	12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	BAG3	O95817	575 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	AKR1A1	P14550	325 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	RAB3GAP1	Q15042	981 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	ATF7IP	Q6VMQ6	1270 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	ABRA	Q8N0Z2	381 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	NUP133	Q8WUM0	1156 aa		12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	TSEN34	Q9BSV6	310 aa	Known RBP	12.64	□□□□□ -0.39
RRP12-215	ENST00000622320	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms