RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 ABCC11Q96J66 1382 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 GAS7O60861 476 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 EPHB1P54762 984 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 EBAG9O00559 213 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 TBC1D8BQ0IIM8 1120 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 MAGED2Q9UNF1 606 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 POLA1P09884 1462 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 NELFCDQ8IXH7 590 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 COPRSQ9NQ92 184 aa13.38□□□□□ -0.27
SLC6A6-210ENST00000622186 PCDH11XQ9BZA7 1347 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 PCDH11YQ9BZA8 1340 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 TMEM191BP0C7N4 346 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 VPS18Q9P253 973 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 ARL4DP49703 201 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 C2CD5Q86YS7 1000 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 FAM71BQ8TC56 605 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 SPDL1Q96EA4 605 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 NONOQ15233 471 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■■■□□ 14.9
SLC6A6-210ENST00000622186 DYMQ7RTS9 669 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 LMNTD2Q8IXW0 634 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 DBN1Q16643 649 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 MMEL1Q495T6 779 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 MAPKAPK5Q8IW41 473 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 ARMT1Q9H993 441 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 A6NJR5 290 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 F8W8V4 182 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 NEMP1O14524 444 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 PTK2BQ14289 1009 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 NEUROG2Q9H2A3 272 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 NRBP2Q9NSY0 501 aa13.37□□□□□ -0.27
SLC6A6-210ENST00000622186 CAPN2P17655 700 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 TFCP2Q12800 502 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 DNAJC25Q9H1X3 360 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 GNGT2O14610 69 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 SRGAP2BP0DMP2 458 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 TFDP1Q14186 410 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 ANKRD20A3Q5VUR7 823 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 CERS3Q8IU89 383 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 FAM76AQ8TAV0 307 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 LRWD1Q9UFC0 647 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 SUGT1Q9Y2Z0 365 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 ARHGAP42A6NI28 874 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 NFKBIAP25963 317 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 BEND3Q5T5X7 828 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 GPIHBP1Q8IV16 184 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 PLCH2O75038 1416 aa13.36□□□□□ -0.27
SLC6A6-210ENST00000622186 IFNB1P01574 187 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 CALCRLQ16602 461 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 TGFBRAP1Q8WUH2 860 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 NPR1P16066 1061 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 MIS12Q9H081 205 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 TEKT2Q9UIF3 430 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 TPCN1Q9ULQ1 816 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 ALDH1L1O75891 902 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 SLFN5Q08AF3 891 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 MAIP1Q8WWC4 291 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 SNX25Q9H3E2 840 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 PPARDQ03181 441 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 SKAP1Q86WV1 359 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 LRGUKQ96M69 825 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
SLC6A6-210ENST00000622186 GSTA4O15217 222 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms