RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NCAPHQ15003 741 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 SHC4Q6S5L8 630 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 STAG1Q8WVM7 1258 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 ANKRD7Q92527 254 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MTA3Q9BTC8 594 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 ARMT1Q9H993 441 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 DAGLAQ9Y4D2 1042 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 PAXBP1Q9Y5B6 917 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 ADAMTSL1Q8N6G6 1762 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 FMNL1O95466 1100 aaPredicted RBP20.04■□□□□ 0.8
FAM3A-222ENST00000621967 SKILP12757 684 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 IFNAR1P17181 557 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 SYKP43405 635 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MMP14P50281 582 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 TPD52L1Q16890 204 aaPredicted RBP20.04■□□□□ 0.8
FAM3A-222ENST00000621967 RESP18Q5W5W9 173 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MICALL2Q8IY33 904 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 FAM163AQ96GL9 167 aaPredicted RBP20.04■□□□□ 0.8
FAM3A-222ENST00000621967 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MRIQ9BWK5 157 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 SLC12A7Q9Y666 1083 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 IFIT3O14879 490 aaKnown RBP20.03■□□□□ 0.8
FAM3A-222ENST00000621967 IKBKBO14920 756 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 LMOD1P29536 600 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-222ENST00000621967 BTDP43251 543 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 TRIM29Q14134 588 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 SYCP1Q15431 976 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 NYAP1Q6ZVC0 841 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 FILIP1Q7Z7B0 1213 aa20.03■□□□□ 0.8
FAM3A-222ENST00000621967 CCDC94Q9BW85 323 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-222ENST00000621967 CNOT7Q9UIV1 285 aaKnown RBP20.03■□□□□ 0.8
FAM3A-222ENST00000621967 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.8
FAM3A-222ENST00000621967 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
FAM3A-222ENST00000621967 ZDHHC15Q96MV8 337 aa20.02■□□□□ 0.8
FAM3A-222ENST00000621967 MYL10Q9BUA6 226 aa20.02■□□□□ 0.8
FAM3A-222ENST00000621967 BAZ2AQ9UIF9 1905 aaKnown RBP20.02■□□□□ 0.8
FAM3A-222ENST00000621967 GPR75-ASB3A0A0A6YYF3 556 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 GLTPD2A6NH11 291 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 H7C1D1 291 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 CUTAO60888 179 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 GNL2Q13823 731 aaKnown RBP20.02■□□□□ 0.79
FAM3A-222ENST00000621967 DLGAP5Q15398 846 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 CERS3Q8IU89 383 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 LCORLQ8N3X6 602 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 WASF1Q92558 559 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 GPRC5DQ9NZD1 345 aa20.02■□□□□ 0.79
FAM3A-222ENST00000621967 SHTN1A0MZ66 631 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 BIN1O00499 593 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 RCAN1P53805 252 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 ZNF280AP59817 542 aaPredicted RBP20.01■□□□□ 0.79
FAM3A-222ENST00000621967 DYNLL1P63167 89 aaKnown RBP20.01■□□□□ 0.79
FAM3A-222ENST00000621967 TPM4P67936 248 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 RIOK1Q9BRS2 568 aaKnown RBP20.01■□□□□ 0.79
FAM3A-222ENST00000621967 SLC26A6Q9BXS9 759 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 XPO4Q9C0E2 1151 aaKnown RBP20.01■□□□□ 0.79
FAM3A-222ENST00000621967 MYOZ2Q9NPC6 264 aa20.01■□□□□ 0.79
FAM3A-222ENST00000621967 USP27XA6NNY8 438 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 PLCG2P16885 1265 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 NACAP1Q9BZK3 213 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 PRKAB2O43741 272 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 DHX8Q14562 1220 aaKnown RBP20■□□□□ 0.79
FAM3A-222ENST00000621967 ELOA2Q8IYF1 753 aaPredicted RBP20■□□□□ 0.79
FAM3A-222ENST00000621967 HSD3B7Q9H2F3 369 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 IFNKQ9P0W0 207 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 PCDHAC2Q9Y5I4 1007 aa20■□□□□ 0.79
FAM3A-222ENST00000621967 UBE2Q2LH0YL09 131 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 MMP1P03956 469 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 PPP4CP60510 307 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 RBM26Q5T8P6 1007 aaKnown RBP19.99■□□□□ 0.79
FAM3A-222ENST00000621967 CEP135Q66GS9 1140 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 APOBEC3HQ6NTF7 200 aaKnown RBP19.99■□□□□ 0.79
FAM3A-222ENST00000621967 NOSTRINQ8IVI9 506 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 CCAR2Q8N163 923 aaKnown RBP19.99■□□□□ 0.79
FAM3A-222ENST00000621967 CCDC150Q8NCX0 1101 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 CRNKL1Q9BZJ0 848 aaKnown RBP19.99■□□□□ 0.79
FAM3A-222ENST00000621967 SLC4A4Q9Y6R1 1079 aa19.99■□□□□ 0.79
FAM3A-222ENST00000621967 SPDYE2BA6NHP3 402 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 SPDYE6P0CI01 402 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 TDO2P48775 406 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 SART3Q15020 963 aaKnown RBP19.98■□□□□ 0.79
FAM3A-222ENST00000621967 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
FAM3A-222ENST00000621967 KCNJ6P48051 423 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 WTAPQ15007 396 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 RTN1Q16799 776 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 TBC1D10BQ4KMP7 808 aaPredicted RBP19.98■□□□□ 0.79
FAM3A-222ENST00000621967 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 MTMR14Q8NCE2 650 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 SH3RF3Q8TEJ3 882 aaPredicted RBP19.98■□□□□ 0.79
FAM3A-222ENST00000621967 CLIC6Q96NY7 704 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 USP40Q9NVE5 1235 aa19.98■□□□□ 0.79
FAM3A-222ENST00000621967 MYO1BO43795 1136 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 SMC2O95347 1197 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 EPS15P42566 896 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 NCBP1Q09161 790 aaKnown RBP19.97■□□□□ 0.79
FAM3A-222ENST00000621967 PTPN14Q15678 1187 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
FAM3A-222ENST00000621967 METTL16Q86W50 562 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms