RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 MYH7P12883 1935 aa28.81■■■□□ 2.2
ATXN3-253ENST00000621269 RNF113AO15541 343 aaKnown RBP28.81■■■□□ 2.2
ATXN3-253ENST00000621269 ANKLE1Q8NAG6 615 aa28.81■■■□□ 2.2
ATXN3-253ENST00000621269 LPAR1Q92633 364 aa28.81■■■□□ 2.2
ATXN3-253ENST00000621269 PAWRQ96IZ0 340 aaKnown RBP28.81■■■□□ 2.2
ATXN3-253ENST00000621269 TMX2Q9Y320 296 aa28.81■■■□□ 2.2
ATXN3-253ENST00000621269 SMIM22K7EJ46 135 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 ZFYP08048 801 aaPredicted RBP28.8■■■□□ 2.2
ATXN3-253ENST00000621269 RRP1P56182 461 aaKnown RBP28.8■■■□□ 2.2
ATXN3-253ENST00000621269 MAP2K5Q13163 448 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 MAP3K21Q5TCX8 1036 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 NECAB2Q7Z6G3 386 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 CLEC10AQ8IUN9 316 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 APPBP2Q92624 585 aa28.8■■■□□ 2.2
ATXN3-253ENST00000621269 SLC15A5A6NIM6 579 aa28.79■■■□□ 2.2
ATXN3-253ENST00000621269 ERC2O15083 957 aa28.79■■■□□ 2.2
ATXN3-253ENST00000621269 LRRFIP1Q32MZ4 808 aaKnown RBP28.79■■■□□ 2.2
ATXN3-253ENST00000621269 SIAH1Q8IUQ4 282 aa28.79■■■□□ 2.2
ATXN3-253ENST00000621269 BAZ2AQ9UIF9 1905 aaKnown RBP28.79■■■□□ 2.2
ATXN3-253ENST00000621269 TTC41PQ6P2S7 1318 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 EVI5O60447 810 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 PTPREP23469 700 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 ATP2B2Q01814 1243 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 CACNB2Q08289 660 aaPredicted RBP28.78■■■□□ 2.2
ATXN3-253ENST00000621269 CCL14Q16627 93 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 GIMAP6Q6P9H5 292 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 SPICE1Q8N0Z3 855 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 OSBP2Q969R2 916 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 VCPKMTQ9H867 229 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 KANSL2Q9H9L4 492 aa28.78■■■□□ 2.2
ATXN3-253ENST00000621269 SBK1Q52WX2 424 aa28.77■■■□□ 2.2
ATXN3-253ENST00000621269 KIAA1755Q5JYT7 1200 aa28.77■■■□□ 2.2
ATXN3-253ENST00000621269 GSG1L2A8MUP6 293 aa28.76■■■□□ 2.19
ATXN3-253ENST00000621269 FLOT1O75955 427 aa28.76■■■□□ 2.19
ATXN3-253ENST00000621269 EEF2P13639 858 aaKnown RBP28.76■■■□□ 2.19
ATXN3-253ENST00000621269 DIS3LQ8TF46 1054 aaKnown RBP28.76■■■□□ 2.19
ATXN3-253ENST00000621269 ZBTB47Q9UFB7 747 aaPredicted RBP28.76■■■□□ 2.19
ATXN3-253ENST00000621269 MYH8P13535 1937 aa28.76■■■□□ 2.19
ATXN3-253ENST00000621269 GNAT2P19087 354 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 DSG3P32926 999 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 MFSD14CQ5VZR4 134 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 CHRDL2Q6WN34 429 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 MB21D1Q8N884 522 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 NBPF3Q9H094 633 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 OGDHLQ9ULD0 1010 aa28.75■■■□□ 2.19
ATXN3-253ENST00000621269 MINDY4BA8MYZ0 360 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 WDR46O15213 610 aaKnown RBP28.74■■■□□ 2.19
ATXN3-253ENST00000621269 GPAA1O43292 621 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 APPP05067 770 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 GRB14Q14449 540 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 MOV10L1Q9BXT6 1211 aaKnown RBP28.74■■■□□ 2.19
ATXN3-253ENST00000621269 SPATC1LQ9H0A9 340 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 MKNK2Q9HBH9 465 aa28.74■■■□□ 2.19
ATXN3-253ENST00000621269 PLS1Q14651 629 aa28.73■■■□□ 2.19
ATXN3-253ENST00000621269 SAMD1Q6SPF0 538 aaPredicted RBP28.73■■■□□ 2.19
ATXN3-253ENST00000621269 STK11IPQ8N1F8 1099 aa28.73■■■□□ 2.19
ATXN3-253ENST00000621269 GOPCQ9HD26 462 aa28.73■■■□□ 2.19
ATXN3-253ENST00000621269 STRNO43815 780 aa28.72■■■□□ 2.19
ATXN3-253ENST00000621269 RAD21O60216 631 aa28.72■■■□□ 2.19
ATXN3-253ENST00000621269 CCND3P30281 292 aaPredicted RBP28.72■■■□□ 2.19
ATXN3-253ENST00000621269 TDO2P48775 406 aa28.72■■■□□ 2.19
ATXN3-253ENST00000621269 SHCBP1Q8NEM2 672 aa28.72■■■□□ 2.19
ATXN3-253ENST00000621269 M0R2C6 588 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 HOXC6P09630 235 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 MX1P20591 662 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 DPP9Q86TI2 863 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 PI4K2BQ8TCG2 481 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 OTUD7AQ8TE49 926 aaPredicted RBP28.71■■■□□ 2.19
ATXN3-253ENST00000621269 ATG4CQ96DT6 458 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 CRBNQ96SW2 442 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 FSD1Q9BTV5 496 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 C11orf49Q9H6J7 331 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 FLRT1Q9NZU1 646 aa28.71■■■□□ 2.19
ATXN3-253ENST00000621269 ERCC3P19447 782 aa28.7■■■□□ 2.18
ATXN3-253ENST00000621269 MROH8Q9H579 483 aa28.7■■■□□ 2.18
ATXN3-253ENST00000621269 ZNF287Q9HBT7 754 aa28.7■■■□□ 2.18
ATXN3-253ENST00000621269 PCDH10Q9P2E7 1040 aa28.7■■■□□ 2.18
ATXN3-253ENST00000621269 PATL2C9JE40 543 aaKnown RBP28.69■■■□□ 2.18
ATXN3-253ENST00000621269 RASA1P20936 1047 aa28.69■■■□□ 2.18
ATXN3-253ENST00000621269 NCAPG2Q86XI2 1143 aa28.69■■■□□ 2.18
ATXN3-253ENST00000621269 NPLOC4Q8TAT6 608 aa28.69■■■□□ 2.18
ATXN3-253ENST00000621269 NACAP1Q9BZK3 213 aa28.69■■■□□ 2.18
ATXN3-253ENST00000621269 ROBO3Q96MS0 1386 aa28.68■■■□□ 2.18
ATXN3-253ENST00000621269 ADORA2AP29274 412 aa28.68■■■□□ 2.18
ATXN3-253ENST00000621269 MNX1P50219 401 aaPredicted RBP28.68■■■□□ 2.18
ATXN3-253ENST00000621269 FXR1P51114 621 aaKnown RBP eCLIP28.68■■■□□ 2.18
ATXN3-253ENST00000621269 ANKRD45Q5TZF3 282 aa28.68■■■□□ 2.18
ATXN3-253ENST00000621269 YTHDC1Q96MU7 727 aaKnown RBP28.68■■■□□ 2.18
ATXN3-253ENST00000621269 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.68■■■□□ 2.18
ATXN3-253ENST00000621269 EPB41L4AQ9HCS5 686 aaPredicted RBP28.68■■■□□ 2.18
ATXN3-253ENST00000621269 SLC5A4Q9NY91 659 aa28.68■■■□□ 2.18
ATXN3-253ENST00000621269 CNGA1P29973 690 aa28.67■■■□□ 2.18
ATXN3-253ENST00000621269 LHX8Q68G74 356 aa28.67■■■□□ 2.18
ATXN3-253ENST00000621269 ZNF444Q8N0Y2 327 aaPredicted RBP28.67■■■□□ 2.18
ATXN3-253ENST00000621269 RBM27Q9P2N5 1060 aaKnown RBP28.67■■■□□ 2.18
ATXN3-253ENST00000621269 IFNL3Q8IZI9 196 aa28.66■■■□□ 2.18
ATXN3-253ENST00000621269 SEC62Q99442 399 aaKnown RBP28.66■■■□□ 2.18
ATXN3-253ENST00000621269 NYAP2Q9P242 653 aa28.66■■■□□ 2.18
ATXN3-253ENST00000621269 A0A0G2JMZ2 1700 aa28.66■■■□□ 2.18
ATXN3-253ENST00000621269 SLC25A27O95847 323 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms