RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 DHX58Q96C10 678 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 PAGE5Q96GU1 130 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 WNT7AO00755 349 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 PRDM1O75626 825 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 BMP15O95972 392 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 DYNLL1P63167 89 aaKnown RBP9.2□□□□□ -0.94
GDNF-208ENST00000620847 SYMPKQ92797 1274 aaKnown RBP9.2□□□□□ -0.94
GDNF-208ENST00000620847 CDCA7Q9BWT1 371 aaPredicted RBP9.2□□□□□ -0.94
GDNF-208ENST00000620847 RSPH14Q9UHP6 348 aa9.2□□□□□ -0.94
GDNF-208ENST00000620847 V9GY48 417 aaPredicted RBP9.2□□□□□ -0.94
GDNF-208ENST00000620847 SEC31AO94979 1220 aaKnown RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 CALM1P0DP23 149 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 CALM2P0DP24 149 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 CALM3P0DP25 149 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 CD44P16070 742 aaKnown RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 ST5P78524 1137 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 DPYDQ12882 1025 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 SPATA1Q5VX52 437 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 GPR161Q8N6U8 529 aaKnown RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 CCDC34Q96HJ3 373 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 KIAA1551Q9HCM1 1747 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 hCG_1642624A0A1W2PR95 340 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 DDAH1O94760 285 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 CTR9Q6PD62 1173 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 TMTC3Q6ZXV5 915 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 IQCA1Q86XH1 822 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 ANKRD18AQ8IVF6 992 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 GSDMAQ96QA5 445 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 BSDC1Q9NW68 430 aaPredicted RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 ZNF831Q5JPB2 1677 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 PBX1P40424 430 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 MAP3K9P80192 1104 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 SF3B3Q15393 1217 aaKnown RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 CDKAL1Q5VV42 579 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 C3orf67Q6ZVT6 689 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 C10orf67Q8IYJ2 551 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 GOLGA5Q8TBA6 731 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 ACSBG1Q96GR2 724 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 PANX2Q96RD6 677 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 WDR24Q96S15 920 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
GDNF-208ENST00000620847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
GDNF-208ENST00000620847 CNTNAP5Q8WYK1 1306 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 SYNRGQ9UMZ2 1314 aa9.19□□□□□ -0.94
GDNF-208ENST00000620847 MAST2Q6P0Q8 1798 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 MYO1CO00159 1063 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 AFMP43652 599 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 DDB1Q16531 1140 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 CAVIN4Q5BKX8 364 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 CC2D1AQ6P1N0 951 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 EXOC4Q96A65 974 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 FAM84BQ96KN1 310 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 AKR1B15C9JRZ8 316 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 TEX33O43247 280 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 TBC1D8O95759 1140 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 CASP1P29466 404 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 CASQ1P31415 396 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 ATP2C1P98194 919 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 CLEC4GQ6UXB4 293 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 UBXN6Q9BZV1 441 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 BRMS1Q9HCU9 246 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 ADD3Q9UEY8 706 aaKnown RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 CCDC88AQ3V6T2 1871 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 SPATA31A1Q5TZJ5 1347 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 AHDC1Q5TGY3 1603 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 SEMA3EO15041 775 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 ORC4O43929 436 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 GNG11P61952 73 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 ZNF174Q15697 407 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 TTC38Q5R3I4 469 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 JAKMIP3Q5VZ66 844 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 FAM177A1Q8N128 213 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 MARCH10Q8NA82 808 aaPredicted RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 PSD3Q9NYI0 1048 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 MINPP1Q9UNW1 487 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 THRAP3Q9Y2W1 955 aaKnown RBP9.18□□□□□ -0.94
GDNF-208ENST00000620847 MRFAP1Q9Y605 127 aa9.18□□□□□ -0.94
GDNF-208ENST00000620847 LMAN1P49257 510 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 E2F4Q16254 413 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 LEKR1Q6ZMV7 388 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 SRBD1Q8N5C6 995 aaKnown RBP9.17□□□□□ -0.94
GDNF-208ENST00000620847 NSUN4Q96CB9 384 aaKnown RBP9.17□□□□□ -0.94
GDNF-208ENST00000620847 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 USP17L21D6R901 530 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 PTGDRQ13258 359 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 FBXO33Q7Z6M2 555 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 CTAGE1Q96RT6 745 aa9.17□□□□□ -0.94
GDNF-208ENST00000620847 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
GDNF-208ENST00000620847 XDHP47989 1333 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms