RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 A0A1W2PRG0 241 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 USP17L12C9JPN9 530 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 USP17L21D6R901 530 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 CNMDO75829 334 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 AKR1B1P15121 316 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 RGS2P41220 211 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 TMEM179Q6ZVK1 233 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 CLEC10AQ8IUN9 316 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 OTUD7AQ8TE49 926 aaPredicted RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 PUS7LQ9H0K6 701 aaKnown RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 SALL3Q9BXA9 1300 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 SMIM22K7EJ46 135 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 GLRX3O76003 335 aaKnown RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 PRKAR2AP13861 404 aaKnown RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 ATP2B2Q01814 1243 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 CHRDL2Q6WN34 429 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 STK11IPQ8N1F8 1099 aa19.25■□□□□ 0.67
CD40-207ENST00000620709 PAWRQ96IZ0 340 aaKnown RBP19.25■□□□□ 0.67
CD40-207ENST00000620709 MX1P20591 662 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 CDK8P49336 464 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 CCL14Q16627 93 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 TTC22Q5TAA0 569 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 C12orf60Q5U649 245 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 DIS3LQ8TF46 1054 aaKnown RBP19.24■□□□□ 0.67
CD40-207ENST00000620709 CRISPLD2Q9H0B8 497 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 BTBD7Q9P203 1132 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 NR2E3Q9Y5X4 410 aa19.24■□□□□ 0.67
CD40-207ENST00000620709 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
CD40-207ENST00000620709 RAD21O60216 631 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 EVI5O60447 810 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 PDE1AP54750 535 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 ICA1Q05084 483 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 MORN1Q5T089 497 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 SPICE1Q8N0Z3 855 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 RBM19Q9Y4C8 960 aaKnown RBP19.23■□□□□ 0.67
CD40-207ENST00000620709 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
CD40-207ENST00000620709 XRCC5P13010 732 aaKnown RBP19.22■□□□□ 0.67
CD40-207ENST00000620709 NECAB2Q7Z6G3 386 aa19.22■□□□□ 0.67
CD40-207ENST00000620709 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
CD40-207ENST00000620709 CAPN2P17655 700 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 CACNB2Q08289 660 aaPredicted RBP19.21■□□□□ 0.67
CD40-207ENST00000620709 MAP2K5Q13163 448 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 COG2Q14746 738 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 APBA2Q99767 749 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 HOXC10Q9NYD6 342 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
CD40-207ENST00000620709 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
CD40-207ENST00000620709 PTPREP23469 700 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 PLS1Q14651 629 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 KIAA1755Q5JYT7 1200 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 C16orf86Q6ZW13 317 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 KBTBD3Q8NAB2 608 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 USP6NLQ92738 828 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 CCDC17Q96LX7 622 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 MINDY4BA8MYZ0 360 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 CCND3P30281 292 aaPredicted RBP19.2■□□□□ 0.66
CD40-207ENST00000620709 LBX2Q6XYB7 198 aa19.2■□□□□ 0.66
CD40-207ENST00000620709 STRBPQ96SI9 672 aaKnown RBP19.2■□□□□ 0.66
CD40-207ENST00000620709 SLC15A5A6NIM6 579 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 RNF113AO15541 343 aaKnown RBP19.19■□□□□ 0.66
CD40-207ENST00000620709 FLOT1O75955 427 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 APPP05067 770 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 SIAH1Q8IUQ4 282 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 ANKLE1Q8NAG6 615 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 ARPP21Q9UBL0 812 aaPredicted RBP19.19■□□□□ 0.66
CD40-207ENST00000620709 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
CD40-207ENST00000620709 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
CD40-207ENST00000620709 MFSD14CQ5VZR4 134 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 APPBP2Q92624 585 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 LPAR1Q92633 364 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 OSBP2Q969R2 916 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 MOV10L1Q9BXT6 1211 aaKnown RBP19.18■□□□□ 0.66
CD40-207ENST00000620709 NBPF3Q9H094 633 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 VCPKMTQ9H867 229 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 MKNK2Q9HBH9 465 aa19.18■□□□□ 0.66
CD40-207ENST00000620709 TTC41PQ6P2S7 1318 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 CNGA1P29973 690 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 TDO2P48775 406 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 DPP9Q86TI2 863 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 C7orf61Q8IZ16 206 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 C11orf49Q9H6J7 331 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 FLRT1Q9NZU1 646 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 RBM27Q9P2N5 1060 aaKnown RBP19.17■□□□□ 0.66
CD40-207ENST00000620709 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
CD40-207ENST00000620709 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 M0R2C6 588 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 GPAA1O43292 621 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 DSG3P32926 999 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 FXR1P51114 621 aaKnown RBP eCLIP19.16■□□□□ 0.66
CD40-207ENST00000620709 NCAPG2Q86XI2 1143 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 ATG4CQ96DT6 458 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 SPATC1LQ9H0A9 340 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 KANSL2Q9H9L4 492 aa19.16■□□□□ 0.66
CD40-207ENST00000620709 OGDHLQ9ULD0 1010 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms