RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 DNAJC5GQ8N7S2 189 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 NUP88Q99567 741 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 LY9Q9HBG7 655 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 COL11A1P12107 1806 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 SH2B2O14492 632 aaPredicted RBP16.04■□□□□ 0.16
NEK3-210ENST00000620675 ANAPC15P60006 121 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 CCL15Q16663 113 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 MKL1Q969V6 931 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 IL17RAQ96F46 866 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 KIAA1683Q9H0B3 1180 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
NEK3-210ENST00000620675 CXCL11O14625 94 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 SNAPC2Q13487 334 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 GADL1Q6ZQY3 521 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 F5H6K3 240 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 IGF2BP3O00425 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
NEK3-210ENST00000620675 KLRC3Q07444 240 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 GPAT2Q6NUI2 795 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 Q6ZUG5 572 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 MYL10Q9BUA6 226 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 VCPKMTQ9H867 229 aa16.03■□□□□ 0.16
NEK3-210ENST00000620675 NDUFB10O96000 172 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 VCAM1P19320 739 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 SH3D19Q5HYK7 790 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.15
NEK3-210ENST00000620675 DGKHQ86XP1 1220 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 MYH6P13533 1939 aa16.02■□□□□ 0.15
NEK3-210ENST00000620675 CENPFP49454 3210 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 BTBD19C9JJ37 291 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 EIF5BO60841 1220 aaKnown RBP16.01■□□□□ 0.15
NEK3-210ENST00000620675 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
NEK3-210ENST00000620675 RXRAP19793 462 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 PSMA5P28066 241 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 GTF2A2P52657 109 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 NOGQ13253 232 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 TOB2Q14106 344 aaPredicted RBP16.01■□□□□ 0.15
NEK3-210ENST00000620675 WTAPQ15007 396 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
NEK3-210ENST00000620675 BRPF3Q9ULD4 1205 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 USP17L2Q6R6M4 530 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 PNMA1Q8ND90 353 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 TTC14Q96N46 770 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
NEK3-210ENST00000620675 APOBRQ0VD83 1088 aa16■□□□□ 0.15
NEK3-210ENST00000620675 FAM83BQ5T0W9 1011 aa16■□□□□ 0.15
NEK3-210ENST00000620675 BRF1Q92994 677 aa16■□□□□ 0.15
NEK3-210ENST00000620675 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
NEK3-210ENST00000620675 FBXO28Q9NVF7 368 aa16■□□□□ 0.15
NEK3-210ENST00000620675 TESPA1A2RU30 521 aaPredicted RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 C19orf81C9J6K1 198 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 PEX10O60683 326 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 HMGB1P09429 215 aaKnown RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 CETPP11597 493 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 NEK4P51957 841 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 SLFN13Q68D06 897 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 KCTD1Q719H9 257 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 TMEM87BQ96K49 555 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 C12orf42Q96LP6 360 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 CPVLQ9H3G5 476 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 DOCK3Q8IZD9 2030 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 MANSC4A6NHS7 340 aaPredicted RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 GOLGA8HP0CJ92 632 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 NOL8Q76FK4 1167 aaKnown RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 RPAP3Q9H6T3 665 aaPredicted RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 PDRG1Q9NUG6 133 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 FRMPD2Q68DX3 1309 aaPredicted RBP15.99■□□□□ 0.15
NEK3-210ENST00000620675 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
NEK3-210ENST00000620675 ERICH2A1L162 156 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 CD2BP2O95400 341 aaKnown RBP15.98■□□□□ 0.15
NEK3-210ENST00000620675 PDHBP11177 359 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 NT5C2P49902 561 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 TROAPQ12815 778 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 TTBK2Q6IQ55 1244 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 POTEEQ6S8J3 1075 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 IFNL1Q8IU54 200 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 CCDC144CPQ8IYA2 1237 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 PROCA1Q8NCQ7 364 aaPredicted RBP15.98■□□□□ 0.15
NEK3-210ENST00000620675 GMCL1P1Q8NEA9 526 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 AGXT2Q9BYV1 514 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 GOPCQ9HD26 462 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 TMOD4Q9NZQ9 345 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 DTNBO60941 627 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 CYP2C8P10632 490 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 LIFRP42702 1097 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 TM4SF4P48230 202 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 USP14P54578 494 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 AK2P54819 239 aa15.98■□□□□ 0.15
NEK3-210ENST00000620675 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms