RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 MAMDC4Q6UXC1 1216 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 PTPN18Q99952 460 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 GDF15Q99988 308 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 PHAXQ9H814 394 aaKnown RBP6.69□□□□□ -1.34
CBWD3-215ENST00000619322 GJD2Q9UKL4 321 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 TRAF5O00463 557 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 AOC2O75106 756 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 CCNYL3P0C7X3 344 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 MAPK4P31152 587 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 TTLL5Q6EMB2 1281 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 ERC1Q8IUD2 1116 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 RPAP2Q8IXW5 612 aaPredicted RBP6.69□□□□□ -1.34
CBWD3-215ENST00000619322 RGS22Q8NE09 1264 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 TOX2Q96NM4 488 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 KIAA1683Q9H0B3 1180 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 GNL3LQ9NVN8 582 aaKnown RBP6.69□□□□□ -1.34
CBWD3-215ENST00000619322 ABT1Q9ULW3 272 aaKnown RBP6.69□□□□□ -1.34
CBWD3-215ENST00000619322 STXBP5LQ9Y2K9 1186 aa6.69□□□□□ -1.34
CBWD3-215ENST00000619322 IGKV6D-41A0A0C4DH26 115 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 RBM47A0AV96 593 aaKnown RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 HCLS1P14317 486 aaPredicted RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 FCGRTP55899 365 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 Q3C1V9 767 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 ARID3AQ99856 593 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 NID2Q14112 1375 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 COL4A2P08572 1712 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 IFIT1P09914 478 aaKnown RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 HABP4Q5JVS0 413 aaKnown RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 SESTD1Q86VW0 696 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 MTA3Q9BTC8 594 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 PPP4R2Q9NY27 417 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 WDR81Q562E7 1941 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 FRMPD4Q14CM0 1322 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 GTF2E1P29083 439 aaPredicted RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 FOXC1Q12948 553 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 GRB14Q14449 540 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 FAM177A1Q8N128 213 aaPredicted RBP6.68□□□□□ -1.34
CBWD3-215ENST00000619322 LPAR1Q92633 364 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 SUCLG2Q96I99 432 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 ARHGAP39Q9C0H5 1083 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 PHF24Q9UPV7 400 aa6.68□□□□□ -1.34
CBWD3-215ENST00000619322 MYL6BP14649 208 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 TNNT2P45379 298 aaPredicted RBP6.67□□□□□ -1.34
CBWD3-215ENST00000619322 USP14P54578 494 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 SH3BP2P78314 561 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 CAVIN4Q5BKX8 364 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 RAB11FIP3O75154 756 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 RFC2P35250 354 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 FXR1P51114 621 aaKnown RBP eCLIP6.67□□□□□ -1.34
CBWD3-215ENST00000619322 VGLL4Q14135 290 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 DIXDC1Q155Q3 683 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 AKNAD1Q5T1N1 836 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 MKL1Q969V6 931 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 DAGLAQ9Y4D2 1042 aa6.67□□□□□ -1.34
CBWD3-215ENST00000619322 HSP90AB4PQ58FF6 505 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
CBWD3-215ENST00000619322 APAF1O14727 1248 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 STRNO43815 780 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 PARNO95453 639 aaKnown RBP6.66□□□□□ -1.34
CBWD3-215ENST00000619322 EGFRP00533 1210 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 HMGCRP04035 888 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 HOXD8P13378 290 aaPredicted RBP6.66□□□□□ -1.34
CBWD3-215ENST00000619322 UBXN2AP68543 259 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 CCDC57Q2TAC2 916 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 USP17L2Q6R6M4 530 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 TSPYL6Q8N831 410 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 KIAA1549LQ6ZVL6 1849 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 MAGEB6P1A0A0J9YX57 407 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 KIAA0355O15063 1070 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 CAND2O75155 1236 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 PTPRAP18433 802 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 CRHR2Q13324 411 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 PTPRNQ16849 979 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 ANAPC4Q9UJX5 808 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 RABGAP1Q9Y3P9 1069 aa6.66□□□□□ -1.34
CBWD3-215ENST00000619322 PFKMP08237 780 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 GPTP24298 496 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 SLC19A1P41440 591 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 KIF22Q14807 665 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 TTF1Q15361 905 aaPredicted RBP6.65□□□□□ -1.34
CBWD3-215ENST00000619322 OLFM4Q6UX06 510 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 ANKRD33Q7Z3H0 272 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 OPTNQ96CV9 577 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 APBA2Q99767 749 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 TCP11L1Q9NUJ3 509 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 RPTORQ8N122 1335 aa6.65□□□□□ -1.34
CBWD3-215ENST00000619322 DNM1LO00429 736 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 CNMDO75829 334 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 SGPL1O95470 568 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 REPS2Q8NFH8 660 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 SALL3Q9BXA9 1300 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 NSFL1CQ9UNZ2 370 aaKnown RBP6.65□□□□□ -1.35
CBWD3-215ENST00000619322 RRP7AQ9Y3A4 280 aaKnown RBP6.65□□□□□ -1.35
CBWD3-215ENST00000619322 ARID2Q68CP9 1835 aa6.65□□□□□ -1.35
CBWD3-215ENST00000619322 POM121CA8CG34 1229 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms