RNA–Protein interactions for RNA: ENST00000618855.4

TMPRSS4-220, Transcript of transmembrane serine protease 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMPRSS4, Length 3,531 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-220ENST00000618855 DIP2AQ14689 1571 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 LOC102724428A0A0B4J2F2 783 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 GOLGA6L10A6NI86 522 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 GPAA1O43292 621 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 MFAP3LO75121 409 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 PAFAH1B1P43034 410 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 BCAMP50895 628 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 PLCD1P51178 756 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 SIK1P57059 783 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 IQUBQ8NA54 791 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 KIF20BQ96Q89 1820 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 PXDNQ92626 1479 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 AGLP35573 1532 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 ECM2O94769 699 aaPredicted RBP10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 ABL1P00519 1130 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 RBM5P52756 815 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 GRIN1Q05586 938 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 PDCLQ13371 301 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 SPATA1Q5VX52 437 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 RESP18Q5W5W9 173 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 TICAM2Q86XR7 235 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 TMEM139Q8IV31 216 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 ZNF622Q969S3 477 aaKnown RBP eCLIP10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 CCDC114Q96M63 670 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 NAPBQ9H115 298 aa10.74□□□□□ -0.69
TMPRSS4-220ENST00000618855 COL15A1P39059 1388 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 EYA2O00167 538 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 HNRNPH1P31943 449 aaKnown RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 SLC7A5Q01650 507 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 C2orf54Q08AI8 447 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 NR5A1Q13285 461 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 NOSTRINQ8IVI9 506 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 MAGEB6Q8N7X4 407 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 SELENOOQ9BVL4 669 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 CCNL1Q9UK58 526 aaPredicted RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 IFT172Q9UG01 1749 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 TRIM37O94972 964 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 CRKLP46109 303 aaKnown RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 RNASE9P60153 205 aaKnown RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 KIF5AQ12840 1032 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 ENOX2Q16206 610 aaKnown RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 USP49Q70CQ1 688 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 TRMT1LQ7Z2T5 733 aaKnown RBP10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 MMS19Q96T76 1030 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 SUFUQ9UMX1 484 aa10.73□□□□□ -0.69
TMPRSS4-220ENST00000618855 PHKA1P46020 1223 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 HLTFQ14527 1009 aaKnown RBP eCLIP10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 PDIA6Q15084 440 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 B4GALNT4Q76KP1 1039 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CARD10Q9BWT7 1032 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 TRIM75PA6NK02 468 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 IL15P40933 162 aaPredicted RBP10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 IRAK1P51617 712 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 PPFIA1Q13136 1202 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 TCIRG1Q13488 830 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 SCARF1Q14162 830 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 ZNF174Q15697 407 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 MSANTD4Q8NCY6 345 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 COG1Q8WTW3 980 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CABS1Q96KC9 395 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 SETDB2Q96T68 719 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CHP1Q99653 195 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CSRNP2Q9H175 543 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 PCDHB6Q9Y5E3 794 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 BMP6P22004 513 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CXCR5P32302 372 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 CYLC1P35663 651 aaPredicted RBP10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 RILPL1Q5EBL4 403 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 EPSTI1Q96J88 318 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 TRIM47Q96LD4 638 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 ARMT1Q9H993 441 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 DENND2AQ9ULE3 1009 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 SH3TC1Q8TE82 1336 aa10.72□□□□□ -0.69
TMPRSS4-220ENST00000618855 MYO1FO00160 1098 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 KRT83P78385 493 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 NR1I3Q14994 352 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 RTN1Q16799 776 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 CFAP58Q5T655 872 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 PLIN2Q99541 437 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 PPANQ9NQ55 473 aaKnown RBP10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 RAB21Q9UL25 225 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 ZNF185O15231 689 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 USO1O60763 962 aaKnown RBP10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 ATP1A1P05023 1023 aaKnown RBP10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 ERCC3P19447 782 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 GBP2P32456 591 aaPredicted RBP10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 USP14P54578 494 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 CYP27A1Q02318 531 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 ACTN3Q08043 901 aaPredicted RBP10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 IFT88Q13099 833 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 APOA5Q6Q788 366 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
TMPRSS4-220ENST00000618855 PUS7LQ9H0K6 701 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms