RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 IL6STP40189 918 aaPredicted RBP23.12■■□□□ 1.29
NEK3-208ENST00000618534 ZSCAN10Q96SZ4 725 aaPredicted RBP23.12■■□□□ 1.29
NEK3-208ENST00000618534 ANAPC4Q9UJX5 808 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 BMP15O95972 392 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 TFRCP02786 760 aaKnown RBP23.11■■□□□ 1.29
NEK3-208ENST00000618534 KIF4BQ2VIQ3 1234 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 TTC38Q5R3I4 469 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 SLC35F6Q8N357 371 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 CEP112Q8N8E3 955 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 BLZF1Q9H2G9 400 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 ITIH6Q6UXX5 1313 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 MYH8P13535 1937 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 CYP2D7A0A087X1C5 515 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 H3BQF6 201 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 ABL1P00519 1130 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 FECHP22830 423 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 GYS2P54840 703 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 KRT31Q15323 416 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 NPY5RQ15761 445 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 CDC5LQ99459 802 aaKnown RBP23.11■■□□□ 1.29
NEK3-208ENST00000618534 ABCF2Q9UG63 623 aa23.11■■□□□ 1.29
NEK3-208ENST00000618534 DUOX1Q9NRD9 1551 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 MAGEB6P1A0A0J9YX57 407 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 ERVK-24P63145 666 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 PTGDRQ13258 359 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 IFIT1BQ5T764 474 aaKnown RBP23.1■■□□□ 1.29
NEK3-208ENST00000618534 CATIPQ7Z7H3 387 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 TXLNBQ8N3L3 684 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 CCDC51Q96ER9 411 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 PNKPQ96T60 521 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 CTAGE9A4FU28 777 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 MAP2K7O14733 419 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 CDC25AP30304 524 aa23.1■■□□□ 1.29
NEK3-208ENST00000618534 BRMS1Q9HCU9 246 aa23.09■■□□□ 1.29
NEK3-208ENST00000618534 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 RNF225M0QZC1 329 aaPredicted RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 IGHMBP2P38935 993 aaKnown RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 ATP2C1P98194 919 aaPredicted RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 E2F4Q16254 413 aa23.09■■□□□ 1.29
NEK3-208ENST00000618534 RRAGBQ5VZM2 374 aa23.09■■□□□ 1.29
NEK3-208ENST00000618534 VPS16Q9H269 839 aa23.09■■□□□ 1.29
NEK3-208ENST00000618534 LIMA1Q9UHB6 759 aaKnown RBP23.09■■□□□ 1.29
NEK3-208ENST00000618534 N4BP3O15049 544 aa23.08■■□□□ 1.29
NEK3-208ENST00000618534 CHRNDQ07001 517 aa23.08■■□□□ 1.29
NEK3-208ENST00000618534 BEND6Q5SZJ8 279 aaPredicted RBP23.08■■□□□ 1.29
NEK3-208ENST00000618534 MSANTD4Q8NCY6 345 aa23.08■■□□□ 1.29
NEK3-208ENST00000618534 ABHD10Q9NUJ1 306 aa23.08■■□□□ 1.29
NEK3-208ENST00000618534 BAZ2AQ9UIF9 1905 aaKnown RBP23.08■■□□□ 1.28
NEK3-208ENST00000618534 IRX5P78411 483 aaPredicted RBP23.08■■□□□ 1.28
NEK3-208ENST00000618534 TROAPQ12815 778 aa23.08■■□□□ 1.28
NEK3-208ENST00000618534 RBM28Q9NW13 759 aaKnown RBP23.08■■□□□ 1.28
NEK3-208ENST00000618534 TAB2Q9NYJ8 693 aa23.08■■□□□ 1.28
NEK3-208ENST00000618534 RAB21Q9UL25 225 aa23.08■■□□□ 1.28
NEK3-208ENST00000618534 GPS2Q13227 327 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 CCDC152Q4G0S7 254 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 TMTC1Q8IUR5 882 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 HNRNPLLQ8WVV9 542 aaKnown RBP23.07■■□□□ 1.28
NEK3-208ENST00000618534 MTRQ99707 1265 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 RIOK1Q9BRS2 568 aaKnown RBP23.07■■□□□ 1.28
NEK3-208ENST00000618534 DYNLL1P63167 89 aaKnown RBP23.07■■□□□ 1.28
NEK3-208ENST00000618534 PDXDC2PQ6P474 469 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 TMTC3Q6ZXV5 915 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 IQUBQ8NA54 791 aa23.07■■□□□ 1.28
NEK3-208ENST00000618534 POTEB2H3BUK9 544 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 ARHGAP25P42331 645 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 USP5P45974 858 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 COPB1P53618 953 aaKnown RBP23.06■■□□□ 1.28
NEK3-208ENST00000618534 TUBB2AQ13885 445 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 CNTNAP5Q8WYK1 1306 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 NUP88Q99567 741 aaPredicted RBP23.06■■□□□ 1.28
NEK3-208ENST00000618534 NAPGQ99747 312 aaPredicted RBP23.06■■□□□ 1.28
NEK3-208ENST00000618534 TUBB2BQ9BVA1 445 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 MCM6Q14566 821 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 RWDD2AQ9UIY3 292 aa23.06■■□□□ 1.28
NEK3-208ENST00000618534 LRRC10BA6NIK2 292 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 RHOXF2BP0C7M4 288 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 PAK1Q13153 545 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 IL17AQ16552 155 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 IQCA1Q86XH1 822 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 TRERF1Q96PN7 1200 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 RHOXF2Q9BQY4 288 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 PDE11AQ9HCR9 933 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 ADAM21Q9UKJ8 722 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 COL4A1P02462 1669 aa23.05■■□□□ 1.28
NEK3-208ENST00000618534 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
NEK3-208ENST00000618534 TULP2O00295 520 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 CYP26C1Q6V0L0 522 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 PIK3AP1Q6ZUJ8 805 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 NELFBQ8WX92 580 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 ZBTB9Q96C00 473 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 SLAIN2Q9P270 581 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 MYH13Q9UKX3 1938 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 GTPBP6O43824 516 aaPredicted RBP23.04■■□□□ 1.28
NEK3-208ENST00000618534 GYG1P46976 350 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 EIF5P55010 431 aaKnown RBP23.04■■□□□ 1.28
NEK3-208ENST00000618534 TCP11X2Q5H9J9 407 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 SRBD1Q8N5C6 995 aaKnown RBP23.04■■□□□ 1.28
NEK3-208ENST00000618534 SLF1Q9BQI6 1058 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms