RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CABP4P57796 275 aa16.49■□□□□ 0.23
COL5A1-208ENST00000618395 AP2B1P63010 937 aa16.49■□□□□ 0.23
COL5A1-208ENST00000618395 KRT82Q9NSB4 513 aa16.49■□□□□ 0.23
COL5A1-208ENST00000618395 SESN1Q9Y6P5 492 aa16.49■□□□□ 0.23
COL5A1-208ENST00000618395 CYLC2Q14093 348 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 GLE1Q53GS7 698 aaKnown RBP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 ATP6V0A1Q93050 837 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 STX10O60499 249 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CLCN6P51797 869 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CASP10Q92851 521 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 RIC8AQ9NPQ8 531 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 AATFQ9NY61 560 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 RNF169Q8NCN4 708 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CNNM2Q9H8M5 875 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 WARS2Q9UGM6 360 aaKnown RBP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 MAGEA1P43355 309 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 AK2P54819 239 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 PAK1Q13153 545 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 TMEM259Q4ZIN3 620 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CAVIN4Q5BKX8 364 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CYTH2Q99418 400 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 TEKT2Q9UIF3 430 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 CCDC84Q86UT8 332 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-208ENST00000618395 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 NBPF26B4DH59 902 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 STRN3Q13033 797 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 NBPF15Q8N660 670 aa16.48■□□□□ 0.23
COL5A1-208ENST00000618395 PPP2R5CQ13362 524 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 PPP1R13BQ96KQ4 1090 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 TRAIPQ9BWF2 469 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 ITGB1BP2Q9UKP3 347 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 CFAP73A6NFT4 308 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 OLFML2BQ68BL8 750 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 ZC3H15Q8WU90 426 aaKnown RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 GUCY2DQ02846 1103 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 GOLGA8FQ08AF8 430 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 GOLGA8DPQ0D2H9 430 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 TRMT10CQ7L0Y3 403 aaKnown RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 FAM167BQ9BTA0 163 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 STRIP2Q9ULQ0 834 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 XPO4Q9C0E2 1151 aaKnown RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 KCNK3O14649 394 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 DEAF1O75398 565 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 MCM10Q7L590 875 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 TBC1D1Q86TI0 1168 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-208ENST00000618395 STMN3Q9NZ72 180 aa16.47■□□□□ 0.23
COL5A1-208ENST00000618395 ASPHQ12797 758 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 RBM8AQ9Y5S9 174 aaKnown RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 TRAF5O00463 557 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 HAND2P61296 217 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ING2Q9H160 280 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 UPF3AQ9H1J1 476 aaKnown RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 GSTA1P08263 222 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 GSTA2P09210 222 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ESRRAP11474 423 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ADKP55263 362 aaKnown RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 KLC1Q07866 573 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 CDC23Q9UJX2 597 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ATP11BQ9Y2G3 1177 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ZNF202O95125 648 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 RHBDL2Q9NX52 303 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 RAB14P61106 215 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 CRACR2BQ8N4Y2 399 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-208ENST00000618395 TRIM15Q9C019 465 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 LMBRD1Q9NUN5 540 aa16.46■□□□□ 0.23
COL5A1-208ENST00000618395 ST13P50502 369 aaKnown RBP16.46■□□□□ 0.22
COL5A1-208ENST00000618395 ART3Q13508 389 aa16.46■□□□□ 0.22
COL5A1-208ENST00000618395 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.22
COL5A1-208ENST00000618395 KIF21BO75037 1637 aa16.46■□□□□ 0.22
COL5A1-208ENST00000618395 CAPN1P07384 714 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 CDC25BP30305 580 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 RFWD2Q8NHY2 731 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 RMI1Q9H9A7 625 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 MYO1AQ9UBC5 1043 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 CSGALNACT2Q8N6G5 542 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 ACRBPQ8NEB7 543 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 POLR2DO15514 142 aaKnown RBP16.45■□□□□ 0.22
COL5A1-208ENST00000618395 NBNO60934 754 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 GYG2O15488 501 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 CRYMQ14894 314 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 SFMBT2Q5VUG0 894 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 RSAD2Q8WXG1 361 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 APLFQ8IW19 511 aaPredicted RBP16.45■□□□□ 0.22
COL5A1-208ENST00000618395 FGD6Q6ZV73 1430 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 TSPY2A6NKD2 308 aa16.45■□□□□ 0.22
COL5A1-208ENST00000618395 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms