RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 FASTKD5Q7L8L6 764 aaKnown RBP18.54■□□□□ 0.56
MALAT1-213ENST00000618227 PRRT2Q7Z6L0 340 aaPredicted RBP18.54■□□□□ 0.56
MALAT1-213ENST00000618227 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 MAP3K14Q99558 947 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 VCPKMTQ9H867 229 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 LY9Q9HBG7 655 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
MALAT1-213ENST00000618227 MANSC4A6NHS7 340 aaPredicted RBP18.53■□□□□ 0.56
MALAT1-213ENST00000618227 CETPP11597 493 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 PROCA1Q8NCQ7 364 aaPredicted RBP18.53■□□□□ 0.56
MALAT1-213ENST00000618227 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 MS4A4AQ96JQ5 239 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 FEZ1Q99689 392 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 ZKSCAN3Q9BRR0 538 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 PDRG1Q9NUG6 133 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 ATAD5Q96QE3 1844 aa18.53■□□□□ 0.56
MALAT1-213ENST00000618227 F5H6K3 240 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 KLRC3Q07444 240 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.56
MALAT1-213ENST00000618227 CHST3Q7LGC8 479 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 GMCL1Q96IK5 515 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 UPF3BQ9BZI7 483 aaKnown RBP18.52■□□□□ 0.56
MALAT1-213ENST00000618227 ZCCHC17Q9NP64 241 aaKnown RBP18.52■□□□□ 0.56
MALAT1-213ENST00000618227 EMILIN3Q9NT22 766 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 TMOD4Q9NZQ9 345 aa18.52■□□□□ 0.56
MALAT1-213ENST00000618227 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.52■□□□□ 0.56
MALAT1-213ENST00000618227 TRIM75PA6NK02 468 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CALM1P0DP23 149 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CALM2P0DP24 149 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CALM3P0DP25 149 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 MAP2K2P36507 400 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 NEK4P51957 841 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 FGD1P98174 961 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 ATP2B2Q01814 1243 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 MTMR2Q13614 643 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 Q6ZUG5 572 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CLEC10AQ8IUN9 316 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CAPNS2Q96L46 248 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 SLC45A1Q9Y2W3 748 aa18.51■□□□□ 0.55
MALAT1-213ENST00000618227 CCDC69A6NI79 296 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 DDAH1O94760 285 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 CPA1P15085 419 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 SREBF2Q12772 1141 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 PPP2R5BQ15173 497 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 DCAF4Q8WV16 495 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 PHIPQ8WWQ0 1821 aa18.5■□□□□ 0.55
MALAT1-213ENST00000618227 WDR46O15213 610 aaKnown RBP18.49■□□□□ 0.55
MALAT1-213ENST00000618227 PLA2G6O60733 806 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
MALAT1-213ENST00000618227 TM4SF4P48230 202 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 HMGCS2P54868 508 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 TROAPQ12815 778 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.55
MALAT1-213ENST00000618227 MOGSQ13724 837 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 SYNE3Q6ZMZ3 975 aa18.49■□□□□ 0.55
MALAT1-213ENST00000618227 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
MALAT1-213ENST00000618227 ST18O60284 1047 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 NDUFB10O96000 172 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 MCM2P49736 904 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 TOB2Q14106 344 aaPredicted RBP18.48■□□□□ 0.55
MALAT1-213ENST00000618227 GPATCH4Q5T3I0 446 aaKnown RBP18.48■□□□□ 0.55
MALAT1-213ENST00000618227 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 NFXL1Q6ZNB6 911 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 ANKRD23Q86SG2 305 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 ZNF654Q8IZM8 581 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 LRRC47Q8N1G4 583 aaKnown RBP18.48■□□□□ 0.55
MALAT1-213ENST00000618227 BRF1Q92994 677 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
MALAT1-213ENST00000618227 LRRC2Q9BYS8 371 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 AGTPBP1Q9UPW5 1226 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 SLC12A7Q9Y666 1083 aa18.48■□□□□ 0.55
MALAT1-213ENST00000618227 CCL15-CCL14A0A0B4J2E2 113 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 PDHBP11177 359 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 VCAM1P19320 739 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 CCL15Q16663 113 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 OTUD7BQ6GQQ9 843 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 BRI3BPQ8WY22 251 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
MALAT1-213ENST00000618227 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L15C9J2P7 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L11C9JVI0 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L18D6R9N7 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 BMP3P12645 472 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
MALAT1-213ENST00000618227 KIF5BP33176 963 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms