RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 ARHGEF6Q15052 776 aa12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 PPP2R5EQ16537 467 aa12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 ZBTB8OSQ8IWT0 167 aa12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 POLR3AO14802 1390 aaPredicted RBP12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 MAN1A1P33908 653 aa12.33□□□□□ -0.44
CCDC144B-208ENST00000618081 TMOD1P28289 359 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 XRCC5P13010 732 aaKnown RBP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 MAPK8IP1Q9UQF2 711 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 PCDHB15Q9Y5E8 787 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 N4BP1O75113 896 aaKnown RBP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 PAK2Q13177 524 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 TRIM56Q9BRZ2 755 aaKnown RBP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 LRWD1Q9UFC0 647 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 TNNC2P02585 160 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 ZNF853P0CG23 659 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 GRK7Q8WTQ7 553 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 CPSF2Q9P2I0 782 aaKnown RBP12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 SLC27A2O14975 620 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 NELFBQ8WX92 580 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
CCDC144B-208ENST00000618081 ESYT2A0FGR8 921 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 NDUFAB1O14561 156 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 ZNF202O95125 648 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 KLHL30Q0D2K2 578 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 CSRNP1Q96S65 589 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 ABL1P00519 1130 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 ERCC3P19447 782 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 CCDC68Q9H2F9 335 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 MGEA5O60502 916 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 STMN1P16949 149 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 A0A1B0GUA9 196 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 PPIP5K2O43314 1243 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 HOXC9P31274 260 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
CCDC144B-208ENST00000618081 POLR2BP30876 1174 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 EDC4Q6P2E9 1401 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 ST7Q9NRC1 585 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 KRT26Q7Z3Y9 468 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 TGFBRAP1Q8WUH2 860 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 TRIM31Q9BZY9 425 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 AMFRQ9UKV5 643 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 GSTA1P08263 222 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 GSTA2P09210 222 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 LMNB1P20700 586 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 LIG4P49917 911 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 ANKRD20A3Q5VUR7 823 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 IFIH1Q9BYX4 1025 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 ARHGAP25P42331 645 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 HADHQ16836 314 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 RINT1Q6NUQ1 792 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 CDC37L1Q7L3B6 337 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 HOXB7P09629 217 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 PRPSAP1Q14558 356 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 GTF3C6Q969F1 213 aa12.3□□□□□ -0.44
CCDC144B-208ENST00000618081 BSPRYQ5W0U4 402 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 SKA2Q8WVK7 121 aaPredicted RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RIC8AQ9NPQ8 531 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 TYW1Q9NV66 732 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 STAT1P42224 750 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 ITKQ08881 620 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 MIER3Q7Z3K6 550 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 RNF10Q8N5U6 811 aaKnown RBP12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
CCDC144B-208ENST00000618081 MYO1AQ9UBC5 1043 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms