RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 ELP3Q9H9T3 547 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
UPK1A-204ENST00000617999 PICK1Q9NRD5 415 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 CLIP2Q9UDT6 1046 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 CSADQ9Y600 493 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 RLFQ13129 1914 aa17.86■□□□□ 0.45
UPK1A-204ENST00000617999 USP17L5A8MUK1 530 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 RCAN1P53805 252 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 PPP4R3BQ5MIZ7 849 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 LDLRAD1Q5T700 205 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 CST9Q5W186 159 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 CATIPQ7Z7H3 387 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 ANKRD13AQ8IZ07 590 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 CHMP4CQ96CF2 233 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 ZNF274Q96GC6 653 aaPredicted RBP17.85■□□□□ 0.45
UPK1A-204ENST00000617999 ARHGEF10LQ9HCE6 1279 aa17.85■□□□□ 0.45
UPK1A-204ENST00000617999 SH2B1Q9NRF2 756 aaPredicted RBP17.85■□□□□ 0.45
UPK1A-204ENST00000617999 A0A0G2JMZ2 1700 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 DTNBO60941 627 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 TOMM70O94826 608 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 METAP2P50579 478 aaKnown RBP eCLIP17.84■□□□□ 0.45
UPK1A-204ENST00000617999 FKBP1BP68106 108 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 CCT2P78371 535 aaKnown RBP17.84■□□□□ 0.45
UPK1A-204ENST00000617999 DGKZQ13574 1117 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 GRM4Q14833 912 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 TMTC2Q8N394 836 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 MKL1Q969V6 931 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 FEZ1Q99689 392 aa17.84■□□□□ 0.45
UPK1A-204ENST00000617999 FAM217BQ9NTX9 383 aaPredicted RBP17.84■□□□□ 0.45
UPK1A-204ENST00000617999 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.84■□□□□ 0.45
UPK1A-204ENST00000617999 SPDYE5A6NIY4 337 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 NDUFB10O96000 172 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 SNHG28P0DPA3 235 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 PDHBP11177 359 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 CDC27P30260 824 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 MTMR2Q13614 643 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 CUL4AQ13619 759 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 BECN1Q14457 450 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 ZYXQ15942 572 aaKnown RBP17.83■□□□□ 0.44
UPK1A-204ENST00000617999 RTN1Q16799 776 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
UPK1A-204ENST00000617999 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
UPK1A-204ENST00000617999 SYNPO2Q9UMS6 1093 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 TMX2Q9Y320 296 aa17.83■□□□□ 0.44
UPK1A-204ENST00000617999 COL11A1P12107 1806 aaPredicted RBP17.83■□□□□ 0.44
UPK1A-204ENST00000617999 PLEKHA8P1O95397 391 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 GJA5P36382 358 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 GMCL1P1Q8NEA9 526 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 WDR18Q9BV38 432 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 VCPKMTQ9H867 229 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 ZHX2Q9Y6X8 837 aa17.82■□□□□ 0.44
UPK1A-204ENST00000617999 FRMPD2Q68DX3 1309 aaPredicted RBP17.81■□□□□ 0.44
UPK1A-204ENST00000617999 CNTNAP5Q8WYK1 1306 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 TRIM75PA6NK02 468 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 SLFN13Q68D06 897 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 SYNE3Q6ZMZ3 975 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 C2orf69Q8N8R5 385 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 OTUD5Q96G74 571 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 NUP88Q99567 741 aaPredicted RBP17.81■□□□□ 0.44
UPK1A-204ENST00000617999 KIAA1683Q9H0B3 1180 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 SH2D4AQ9H788 454 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 AS3MTQ9HBK9 375 aa17.81■□□□□ 0.44
UPK1A-204ENST00000617999 F5H6K3 240 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 RAD21O60216 631 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 JAK2O60674 1132 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CTDNEP1O95476 244 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CALM1P0DP23 149 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CALM2P0DP24 149 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CALM3P0DP25 149 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 KLRC3Q07444 240 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 SPP2Q13103 211 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 USP17L2Q6R6M4 530 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 TMTC3Q6ZXV5 915 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 ERO1BQ86YB8 467 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
UPK1A-204ENST00000617999 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 GOPCQ9HD26 462 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 MAD2L2Q9UI95 211 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 AFG3L2Q9Y4W6 797 aa17.8■□□□□ 0.44
UPK1A-204ENST00000617999 RBBP6Q7Z6E9 1792 aaKnown RBP17.79■□□□□ 0.44
UPK1A-204ENST00000617999 PPFIA3O75145 1194 aa17.79■□□□□ 0.44
UPK1A-204ENST00000617999 ADD1P35611 737 aaKnown RBP17.79■□□□□ 0.44
UPK1A-204ENST00000617999 PPATQ06203 517 aa17.79■□□□□ 0.44
UPK1A-204ENST00000617999 PPIL2Q13356 520 aa17.79■□□□□ 0.44
UPK1A-204ENST00000617999 ASPRV1Q53RT3 343 aa17.79■□□□□ 0.44
UPK1A-204ENST00000617999 CMTR1Q8N1G2 835 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms