RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-219ENST00000617757 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-219ENST00000617757 A0A1W2PRG0 241 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 GOLGA8AA7E2F4 631 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 TRAF5O00463 557 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 PPP1R12BO60237 982 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 CDC27P30260 824 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 ATP2B2Q01814 1243 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 NOL9Q5SY16 702 aaKnown RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 NUP133Q8WUM0 1156 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 ZKSCAN4Q969J2 545 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 MAP3K14Q99558 947 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 ARHGEF10LQ9HCE6 1279 aa9.42□□□□□ -0.9
TARDBP-219ENST00000617757 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-219ENST00000617757 USP17L5A8MUK1 530 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 HSP90AA1P07900 732 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 PTPRAP18433 802 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 ECE1P42892 770 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 IREB2P48200 963 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 GRM4Q14833 912 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 NTRK3Q16288 839 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 RTN1Q16799 776 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 CCDC84Q86UT8 332 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 ACER1Q8TDN7 264 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 CHMP4CQ96CF2 233 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
TARDBP-219ENST00000617757 TMX2Q9Y320 296 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 LOC285556D6RIA3 1793 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 MYH15Q9Y2K3 1946 aa9.41□□□□□ -0.9
TARDBP-219ENST00000617757 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-219ENST00000617757 KIF3CO14782 793 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 DHX16O60231 1041 aaKnown RBP9.4□□□□□ -0.9
TARDBP-219ENST00000617757 DTNBO60941 627 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 VGLL4Q14135 290 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-219ENST00000617757 SLFN13Q68D06 897 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 MOB2Q70IA6 237 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 RASGRP2Q7LDG7 609 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 ARMC9Q7Z3E5 817 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 ANKRD13AQ8IZ07 590 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 AS3MTQ9HBK9 375 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 PICK1Q9NRD5 415 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 MAD2L2Q9UI95 211 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 SMC3Q9UQE7 1217 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 MTMR7Q9Y216 660 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 CSADQ9Y600 493 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 SNCAIPQ9Y6H5 919 aa9.4□□□□□ -0.9
TARDBP-219ENST00000617757 COL11A1P12107 1806 aaPredicted RBP9.4□□□□□ -0.91
TARDBP-219ENST00000617757 RLFQ13129 1914 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 BAZ2BQ9UIF8 2168 aaKnown RBP9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CCDC196A0A1B0GTZ2 297 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 F5H6K3 240 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CPLX1O14810 134 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 JAK2O60674 1132 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 PLEKHA8P1O95397 391 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 PARP1P09874 1014 aaKnown RBP9.39□□□□□ -0.91
TARDBP-219ENST00000617757 PDHBP11177 359 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 IFNAR1P17181 557 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 GJB2P29033 226 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 KIF5BP33176 963 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 KLRC3Q07444 240 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
TARDBP-219ENST00000617757 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 TMTC3Q6ZXV5 915 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
TARDBP-219ENST00000617757 GMCL1P1Q8NEA9 526 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 WDR18Q9BV38 432 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 SH2D4AQ9H788 454 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
TARDBP-219ENST00000617757 CNTNAP5Q8WYK1 1306 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 PTPDC1A2A3K4 754 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 UNCXA6NJT0 531 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 USP17L10C9JJH3 530 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 UBE2Q2LH0YL09 131 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms