RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 TCP11L1Q9NUJ3 509 aa37.61■■■■□ 3.61
FMR1-216ENST00000616614 SLC27A2O14975 620 aa37.61■■■■□ 3.61
FMR1-216ENST00000616614 NOM1Q5C9Z4 860 aaKnown RBP37.61■■■■□ 3.61
FMR1-216ENST00000616614 ZSWIM5Q9P217 1185 aa37.61■■■■□ 3.61
FMR1-216ENST00000616614 CPA4Q9UI42 421 aa37.61■■■■□ 3.61
FMR1-216ENST00000616614 E7EWF7 191 aa37.6■■■■□ 3.61
FMR1-216ENST00000616614 PABPC4Q13310 644 aaKnown RBP eCLIP37.6■■■■□ 3.61
FMR1-216ENST00000616614 CREB3L3Q68CJ9 461 aa37.6■■■■□ 3.61
FMR1-216ENST00000616614 C17orf99Q6UX52 265 aa37.6■■■■□ 3.61
FMR1-216ENST00000616614 LRRC47Q8N1G4 583 aaKnown RBP37.6■■■■□ 3.61
FMR1-216ENST00000616614 P2RX7Q99572 595 aaKnown RBP37.6■■■■□ 3.61
FMR1-216ENST00000616614 RPAP3Q9H6T3 665 aaPredicted RBP37.6■■■■□ 3.61
FMR1-216ENST00000616614 PRDM10Q9NQV6 1147 aa37.6■■■■□ 3.61
FMR1-216ENST00000616614 CATSPERGQ6ZRH7 1159 aa37.59■■■■□ 3.61
FMR1-216ENST00000616614 ZKSCAN3Q9BRR0 538 aa37.59■■■■□ 3.61
FMR1-216ENST00000616614 OSBPP22059 807 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 LPAR1Q92633 364 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 KRT23Q9C075 422 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 CNNM2Q9H8M5 875 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 PNMA3Q9UL41 463 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 STX8Q9UNK0 236 aa37.58■■■■□ 3.61
FMR1-216ENST00000616614 USP17L15C9J2P7 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L13C9JLJ4 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L11C9JVI0 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L18D6R9N7 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L22D6RA61 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L17D6RBQ6 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L19D6RCP7 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L20D6RJB6 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 F5H6K3 240 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 KLRC3Q07444 240 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 USP17L24Q0WX57 530 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 POTEEQ6S8J3 1075 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 GOPCQ9HD26 462 aa37.57■■■■□ 3.6
FMR1-216ENST00000616614 RCSD1Q6JBY9 416 aa37.56■■■■□ 3.6
FMR1-216ENST00000616614 RAD21O60216 631 aa37.55■■■■□ 3.6
FMR1-216ENST00000616614 NDUFB10O96000 172 aa37.55■■■■□ 3.6
FMR1-216ENST00000616614 IRX3P78415 501 aaPredicted RBP37.55■■■■□ 3.6
FMR1-216ENST00000616614 CAP1Q01518 475 aa37.55■■■■□ 3.6
FMR1-216ENST00000616614 CYB5R4Q7L1T6 521 aa37.55■■■■□ 3.6
FMR1-216ENST00000616614 SMCR8Q8TEV9 937 aaPredicted RBP37.55■■■■□ 3.6
FMR1-216ENST00000616614 FKTNO75072 461 aa37.54■■■■□ 3.6
FMR1-216ENST00000616614 BCRP11274 1271 aa37.54■■■■□ 3.6
FMR1-216ENST00000616614 COL9A3Q14050 684 aaPredicted RBP37.54■■■■□ 3.6
FMR1-216ENST00000616614 NUP88Q99567 741 aaPredicted RBP37.54■■■■□ 3.6
FMR1-216ENST00000616614 SYNPO2Q9UMS6 1093 aa37.54■■■■□ 3.6
FMR1-216ENST00000616614 PEX10O60683 326 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 NT5C2P49902 561 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 HERVK_113P62684 666 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 SP3Q02447 781 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 GMCL1P1Q8NEA9 526 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 TMEM47Q9BQJ4 181 aa37.53■■■■□ 3.6
FMR1-216ENST00000616614 WDR46O15213 610 aaKnown RBP37.52■■■■□ 3.6
FMR1-216ENST00000616614 PPP4R3BQ5MIZ7 849 aa37.52■■■■□ 3.6
FMR1-216ENST00000616614 FAM83BQ5T0W9 1011 aa37.52■■■■□ 3.6
FMR1-216ENST00000616614 RASEFQ8IZ41 740 aa37.52■■■■□ 3.6
FMR1-216ENST00000616614 TANGO6Q9C0B7 1094 aa37.52■■■■□ 3.6
FMR1-216ENST00000616614 TRDNQ13061 729 aa37.51■■■■□ 3.59
FMR1-216ENST00000616614 ANKRD13CQ8N6S4 541 aa37.51■■■■□ 3.59
FMR1-216ENST00000616614 ZSCAN10Q96SZ4 725 aaPredicted RBP37.51■■■■□ 3.59
FMR1-216ENST00000616614 REC8O95072 547 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 SLFN13Q68D06 897 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 RASGRP2Q7LDG7 609 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 NCOA7Q8NI08 942 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 CHMP4CQ96CF2 233 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 TTC14Q96N46 770 aa37.5■■■■□ 3.59
FMR1-216ENST00000616614 COL13A1Q5TAT6 717 aaPredicted RBP37.49■■■■□ 3.59
FMR1-216ENST00000616614 IQCA1Q86XH1 822 aa37.49■■■■□ 3.59
FMR1-216ENST00000616614 TXNRD2Q9NNW7 524 aa37.49■■■■□ 3.59
FMR1-216ENST00000616614 RBPJLQ9UBG7 517 aa37.49■■■■□ 3.59
FMR1-216ENST00000616614 TOP1P11387 765 aaKnown RBP37.48■■■■□ 3.59
FMR1-216ENST00000616614 MB21D2Q8IYB1 491 aaPredicted RBP37.48■■■■□ 3.59
FMR1-216ENST00000616614 ENAHQ8N8S7 591 aaPredicted RBP37.48■■■■□ 3.59
FMR1-216ENST00000616614 CD99L2Q8TCZ2 262 aa37.48■■■■□ 3.59
FMR1-216ENST00000616614 FBXO28Q9NVF7 368 aa37.48■■■■□ 3.59
FMR1-216ENST00000616614 GCLCP48506 637 aaPredicted RBP37.47■■■■□ 3.59
FMR1-216ENST00000616614 ANTXR2P58335 489 aa37.47■■■■□ 3.59
FMR1-216ENST00000616614 COG2Q14746 738 aa37.47■■■■□ 3.59
FMR1-216ENST00000616614 CHST3Q7LGC8 479 aa37.47■■■■□ 3.59
FMR1-216ENST00000616614 RALYLQ86SE5 291 aaKnown RBP37.47■■■■□ 3.59
FMR1-216ENST00000616614 DGKHQ86XP1 1220 aa37.47■■■■□ 3.59
FMR1-216ENST00000616614 TNKSO95271 1327 aa37.47■■■■□ 3.59
FMR1-216ENST00000616614 CASP8AP2Q9UKL3 1982 aa37.46■■■■□ 3.59
FMR1-216ENST00000616614 SPDYE16A6NNV3 312 aaPredicted RBP37.46■■■■□ 3.59
FMR1-216ENST00000616614 CTGFP29279 349 aa37.46■■■■□ 3.59
FMR1-216ENST00000616614 ANKS1AQ92625 1134 aa37.46■■■■□ 3.59
FMR1-216ENST00000616614 ARHGAP39Q9C0H5 1083 aa37.46■■■■□ 3.59
FMR1-216ENST00000616614 ECM2O94769 699 aaPredicted RBP37.45■■■■□ 3.59
FMR1-216ENST00000616614 MCCP23508 829 aa37.45■■■■□ 3.59
FMR1-216ENST00000616614 HSPA4P34932 840 aa37.45■■■■□ 3.59
FMR1-216ENST00000616614 LACTBP83111 547 aaPredicted RBP37.45■■■■□ 3.59
FMR1-216ENST00000616614 RNF20Q5VTR2 975 aa37.45■■■■□ 3.59
FMR1-216ENST00000616614 KCNB2Q92953 911 aa37.45■■■■□ 3.59
FMR1-216ENST00000616614 MYH4Q9Y623 1939 aa37.45■■■■□ 3.59
FMR1-216ENST00000616614 CNMDO75829 334 aa37.44■■■■□ 3.58
FMR1-216ENST00000616614 FLOT1O75955 427 aa37.44■■■■□ 3.58
FMR1-216ENST00000616614 SEC23AQ15436 765 aa37.44■■■■□ 3.58
FMR1-216ENST00000616614 TSGA10IPQ3SY00 556 aa37.44■■■■□ 3.58
FMR1-216ENST00000616614 UBAC1Q9BSL1 405 aa37.44■■■■□ 3.58
FMR1-216ENST00000616614 USP26Q9BXU7 913 aa37.44■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms