RNA–Protein interactions for RNA: ENST00000616596.4

RDM1-220, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best) BASIC

Gene RDM1, Length 1,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-220ENST00000616596 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
RDM1-220ENST00000616596 VCPKMTQ9H867 229 aa18.38■□□□□ 0.53
RDM1-220ENST00000616596 STX8Q9UNK0 236 aa18.38■□□□□ 0.53
RDM1-220ENST00000616596 TNKSO95271 1327 aa18.38■□□□□ 0.53
RDM1-220ENST00000616596 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
RDM1-220ENST00000616596 MCCP23508 829 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 SEC23AQ15436 765 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 ANKRD23Q86SG2 305 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 TMEM47Q9BQJ4 181 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
RDM1-220ENST00000616596 PRC1O43663 620 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 CPA1P15085 419 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 MCM5P33992 734 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 PPP4R3BQ5MIZ7 849 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 DGKHQ86XP1 1220 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
RDM1-220ENST00000616596 TTC14Q96N46 770 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 UBAC1Q9BSL1 405 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
RDM1-220ENST00000616596 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 F5H6K3 240 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 PDHXO00330 501 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 NDUFB10O96000 172 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 TOP1P11387 765 aaKnown RBP18.35■□□□□ 0.53
RDM1-220ENST00000616596 VCAM1P19320 739 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 EXOSC10Q01780 885 aaKnown RBP18.35■□□□□ 0.53
RDM1-220ENST00000616596 KLRC3Q07444 240 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 GOPCQ9HD26 462 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 ZCCHC17Q9NP64 241 aaKnown RBP18.35■□□□□ 0.53
RDM1-220ENST00000616596 GPHNQ9NQX3 736 aaPredicted RBP18.35■□□□□ 0.53
RDM1-220ENST00000616596 WBP1LQ9NX94 342 aa18.35■□□□□ 0.53
RDM1-220ENST00000616596 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
RDM1-220ENST00000616596 MAP2K1Q02750 393 aaPredicted RBP18.34■□□□□ 0.53
RDM1-220ENST00000616596 RASGRP2Q7LDG7 609 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 LPAR1Q92633 364 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 SLC45A1Q9Y2W3 748 aa18.34■□□□□ 0.53
RDM1-220ENST00000616596 WDR19Q8NEZ3 1342 aa18.33■□□□□ 0.53
RDM1-220ENST00000616596 RAD21O60216 631 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 HOXA7P31268 230 aaPredicted RBP18.33■□□□□ 0.52
RDM1-220ENST00000616596 ANAPC15P60006 121 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 SLFN13Q68D06 897 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
RDM1-220ENST00000616596 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 NUP88Q99567 741 aaPredicted RBP18.33■□□□□ 0.52
RDM1-220ENST00000616596 MTA3Q9BTC8 594 aa18.33■□□□□ 0.52
RDM1-220ENST00000616596 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
RDM1-220ENST00000616596 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 WDR46O15213 610 aaKnown RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 TRPA1O75762 1119 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 CASTP20810 708 aaKnown RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 WTAPQ15007 396 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 TMEM67Q5HYA8 995 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 IFIT1BQ5T764 474 aaKnown RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 BLOC1S2Q6QNY1 142 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 CATSPERGQ6ZRH7 1159 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 PNMA1Q8ND90 353 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 TMEM87BQ96K49 555 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 TM6SF1Q9BZW5 370 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
RDM1-220ENST00000616596 R3HDMLQ9H3Y0 253 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 LY9Q9HBG7 655 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 ZSWIM6Q9HCJ5 1215 aa18.32■□□□□ 0.52
RDM1-220ENST00000616596 MGAMO43451 1857 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 ADGRA2Q96PE1 1338 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 ERICH2A1L162 156 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L15C9J2P7 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L13C9JLJ4 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L11C9JVI0 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L18D6R9N7 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L22D6RA61 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L17D6RBQ6 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L19D6RCP7 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L20D6RJB6 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 ALDH1A1P00352 501 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 CYP2C8P10632 490 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 USP17L24Q0WX57 530 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.52
RDM1-220ENST00000616596 CRHR2Q13324 411 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
RDM1-220ENST00000616596 TAF1CQ15572 869 aaPredicted RBP18.31■□□□□ 0.52
RDM1-220ENST00000616596 GMCL1Q96IK5 515 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 CFHR5Q9BXR6 569 aa18.31■□□□□ 0.52
RDM1-220ENST00000616596 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms