RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 KRT40Q6A162 431 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 USP17L2Q6R6M4 530 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 SLC4A10Q6U841 1118 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 CATSPERGQ6ZRH7 1159 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 DPP9Q86TI2 863 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 FBXL18Q96ME1 805 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 XPNPEP3Q9NQH7 507 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 HERC5Q9UII4 1024 aaKnown RBP8.57□□□□□ -1.04
MUC1-227ENST00000615517 ZBTB21Q9ULJ3 1066 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 MTCH2Q9Y6C9 303 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 SPDYE16A6NNV3 312 aaPredicted RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 POU3F3P20264 500 aaPredicted RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 ADORA1P30542 326 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 ZYXQ15942 572 aaKnown RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 ATP2B3Q16720 1220 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 LBX2Q6XYB7 198 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 METTL16Q86W50 562 aaKnown RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 C12orf42Q96LP6 360 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 PHOX2BQ99453 314 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 GNL3LQ9NVN8 582 aaKnown RBP8.56□□□□□ -1.04
MUC1-227ENST00000615517 COG5Q9UP83 839 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 PTPRSQ13332 1948 aa8.56□□□□□ -1.04
MUC1-227ENST00000615517 FANCIQ9NVI1 1328 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 EPOPA6NHQ4 379 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 DCDC2CA8MYV0 355 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 ADAMTS4O75173 837 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 TAL1P17542 331 aaPredicted RBP8.55□□□□□ -1.04
MUC1-227ENST00000615517 CCDC102BQ68D86 513 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 PSRC1Q6PGN9 363 aaPredicted RBP8.55□□□□□ -1.04
MUC1-227ENST00000615517 RNF180Q86T96 592 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 ANKS1AQ92625 1134 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 MOV10L1Q9BXT6 1211 aaKnown RBP8.55□□□□□ -1.04
MUC1-227ENST00000615517 PI4KBQ9UBF8 816 aa8.55□□□□□ -1.04
MUC1-227ENST00000615517 PTPRZ1P23471 2315 aaPredicted RBP8.55□□□□□ -1.04
MUC1-227ENST00000615517 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 STRNO43815 780 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 RARBP10826 455 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 VCAM1P19320 739 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 CDK7P50613 346 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 ACLYP53396 1101 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 CCSAPQ6IQ19 270 aaPredicted RBP8.54□□□□□ -1.04
MUC1-227ENST00000615517 CCDC174Q6PII3 467 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 TEX11Q8IYF3 940 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 TMEM199Q8N511 208 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
MUC1-227ENST00000615517 NSUN4Q96CB9 384 aaKnown RBP8.54□□□□□ -1.04
MUC1-227ENST00000615517 MAML3Q96JK9 1138 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 IL23AQ9NPF7 189 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 STARD7Q9NQZ5 370 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 TET1Q8NFU7 2136 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 ZFHX2Q9C0A1 2572 aaPredicted RBP8.54□□□□□ -1.04
MUC1-227ENST00000615517 CACNA1HO95180 2353 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 PDS5AQ29RF7 1337 aaKnown RBP8.54□□□□□ -1.04
MUC1-227ENST00000615517 TECTAO75443 2155 aa8.54□□□□□ -1.04
MUC1-227ENST00000615517 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 ROBO3Q96MS0 1386 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 MYADML2A6NDP7 307 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 FGBP02675 491 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 ZNF865P0CJ78 1059 aaPredicted RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 ERCC3P19447 782 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 CYP2C18P33260 490 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 EXOSC9Q06265 439 aaKnown RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 SPTY2D1Q68D10 685 aaPredicted RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 OTOP2Q7RTS6 562 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 KLHDC9Q8NEP7 349 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 ACER1Q8TDN7 264 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 HLA-CQ95604 372 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 VWCEQ96DN2 955 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 TSEN34Q9BSV6 310 aaKnown RBP8.53□□□□□ -1.04
MUC1-227ENST00000615517 CERS4Q9HA82 394 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 IL16Q14005 1332 aa8.53□□□□□ -1.04
MUC1-227ENST00000615517 RIF1Q5UIP0 2472 aaKnown RBP8.52□□□□□ -1.05
MUC1-227ENST00000615517 APBB1O00213 710 aa8.52□□□□□ -1.05
MUC1-227ENST00000615517 ARHGEF15O94989 841 aa8.52□□□□□ -1.05
MUC1-227ENST00000615517 GH2P01242 217 aa8.52□□□□□ -1.05
MUC1-227ENST00000615517 KCNA10Q16322 511 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms