RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 HMGCS2P54868 508 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 SPP2Q13103 211 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 GRM1Q13255 1194 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 PPIL2Q13356 520 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 CCDC96Q2M329 555 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 APOA5Q6Q788 366 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 DGKHQ86XP1 1220 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 CCDC144CPQ8IYA2 1237 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 SPICE1Q8N0Z3 855 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 ZNF280CQ8ND82 737 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 NUP133Q8WUM0 1156 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 TSHZ2Q9NRE2 1034 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 NYAP2Q9P242 653 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 BRPF3Q9ULD4 1205 aa10.67□□□□□ -0.7
MMP28-205ENST00000615317 FRMPD2Q68DX3 1309 aaPredicted RBP10.66□□□□□ -0.7
MMP28-205ENST00000615317 GOLGA8AA7E2F4 631 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 IRF6O14896 467 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 DDAH1O94760 285 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 NDUFB10O96000 172 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 LIFRP42702 1097 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 NOVP48745 357 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 ZNF157P51786 506 aaPredicted RBP10.66□□□□□ -0.7
MMP28-205ENST00000615317 HTRA3P83110 453 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 PPATQ06203 517 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 STK3Q13188 491 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 RGMBQ6NW40 437 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 CATIPQ7Z7H3 387 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 SGMS1Q86VZ5 419 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 SIAH1Q8IUQ4 282 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
MMP28-205ENST00000615317 MTA3Q9BTC8 594 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 AGXT2Q9BYV1 514 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 VCPKMTQ9H867 229 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 TPCN1Q9ULQ1 816 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
MMP28-205ENST00000615317 NID2Q14112 1375 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 ZBTB43O43298 467 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 SLC10A3P09131 477 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 PDHBP11177 359 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 VCAM1P19320 739 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 ANKRD1Q15327 319 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 KIAA1755Q5JYT7 1200 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 GADL1Q6ZQY3 521 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 GMCL1P1Q8NEA9 526 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 SLC10A4Q96EP9 437 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 WDR18Q9BV38 432 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 KIAA1683Q9H0B3 1180 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 AFG3L2Q9Y4W6 797 aa10.65□□□□□ -0.7
MMP28-205ENST00000615317 BAZ2BQ9UIF8 2168 aaKnown RBP10.65□□□□□ -0.71
MMP28-205ENST00000615317 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
MMP28-205ENST00000615317 UNCXA6NJT0 531 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 GOLGA8HP0CJ92 632 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 ZBTB48P10074 688 aaPredicted RBP10.64□□□□□ -0.71
MMP28-205ENST00000615317 METAP2P50579 478 aaKnown RBP eCLIP10.64□□□□□ -0.71
MMP28-205ENST00000615317 BACE1P56817 501 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 ST3GAL1Q11201 340 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 GRM4Q14833 912 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 RTN1Q16799 776 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 FAM83BQ5T0W9 1011 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 SPRYD7Q5W111 196 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 SLFN13Q68D06 897 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
MMP28-205ENST00000615317 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 FBXL16Q8N461 479 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
MMP28-205ENST00000615317 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
MMP28-205ENST00000615317 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 TMOD4Q9NZQ9 345 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 SYNPO2Q9UMS6 1093 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
MMP28-205ENST00000615317 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 CCL15-CCL14A0A0B4J2E2 113 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 RASSF10A6NK89 507 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 F5H6K3 240 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 PLEKHA8P1O95397 391 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 SLC1A4P43007 532 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 USP14P54578 494 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 CCT2P78371 535 aaKnown RBP10.63□□□□□ -0.71
MMP28-205ENST00000615317 KLRC3Q07444 240 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 TROAPQ12815 778 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 CCL15Q16663 113 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 ME3Q16798 604 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 TREML2Q5T2D2 321 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
MMP28-205ENST00000615317 SYNE3Q6ZMZ3 975 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 KCTD1Q719H9 257 aa10.63□□□□□ -0.71
MMP28-205ENST00000615317 NECAB1Q8N987 351 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms