RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 JAG1P78504 1218 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 APOBRQ0VD83 1088 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 FSTL1Q12841 308 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 SEPT2Q15019 361 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 ASPRV1Q53RT3 343 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 EAPPQ56P03 285 aaPredicted RBP7.29□□□□□ -1.24
CBWD3-210ENST00000614398 ANKRD13AQ8IZ07 590 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 LPAR1Q92633 364 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 GLIS2Q9BZE0 524 aaPredicted RBP7.29□□□□□ -1.24
CBWD3-210ENST00000614398 CWC22Q9HCG8 908 aaKnown RBP7.29□□□□□ -1.24
CBWD3-210ENST00000614398 RBM27Q9P2N5 1060 aaKnown RBP7.29□□□□□ -1.24
CBWD3-210ENST00000614398 SNCAIPQ9Y6H5 919 aa7.29□□□□□ -1.24
CBWD3-210ENST00000614398 THSD7BQ9C0I4 1608 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 GOLGA8BA8MQT2 603 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 CDKL5O76039 1030 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 EEF2P13639 858 aaKnown RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 IFNAR1P17181 557 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 DDIT3P35638 169 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 HMGN5P82970 282 aaKnown RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 BTNL9Q6UXG8 535 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 FANCBQ8NB91 859 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SENP2Q9HC62 589 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 GPHNQ9NQX3 736 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 PRDM4Q9UKN5 801 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 KCNH4Q9UQ05 1017 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 MYH6P13533 1939 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 RLFQ13129 1914 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 C19orf81C9J6K1 198 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 NMT2O60551 498 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 LARGE1O95461 756 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 PTPRAP18433 802 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 USP14P54578 494 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 PPATQ06203 517 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 C1QBPQ07021 282 aaKnown RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 FUT2Q10981 343 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 PPIL2Q13356 520 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 NTRK3Q16288 839 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 RTN1Q16799 776 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SLC4A8Q2Y0W8 1093 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 GPATCH4Q5T3I0 446 aaKnown RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 TMTC3Q6ZXV5 915 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 CHST3Q7LGC8 479 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SMC1BQ8NDV3 1235 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 TCEANC2Q96MN5 208 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 WRNIP1Q96S55 665 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SPZ1Q9BXG8 430 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 SLKQ9H2G2 1235 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 VCPKMTQ9H867 229 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 GOPCQ9HD26 462 aa7.28□□□□□ -1.24
CBWD3-210ENST00000614398 CIZ1Q9ULV3 898 aaPredicted RBP7.28□□□□□ -1.24
CBWD3-210ENST00000614398 GOLGA8AA7E2F4 631 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 CXCL11O14625 94 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 GDF11O95390 407 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 POTEJP0CG39 1038 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 PDHBP11177 359 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 INPP5BP32019 993 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 ZNF543Q08ER8 600 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 SCRN1Q12765 414 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 CPLX2Q6PUV4 134 aaKnown RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 NFXL1Q6ZNB6 911 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MIGA2Q7L4E1 593 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 ERO1BQ86YB8 467 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MTMR8Q96EF0 704 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 ZKSCAN3Q9BRR0 538 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 GPBP1L1Q9HC44 474 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 AFG3L2Q9Y4W6 797 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MYPNQ86TC9 1320 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 RBBP6Q7Z6E9 1792 aaKnown RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 hCG_1984214I3L0E3 225 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 VGLL4Q14135 290 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MAP1SQ66K74 1059 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 ZNF713Q8N859 430 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 NSUN7Q8NE18 718 aaKnown RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 CTCFLQ8NI51 663 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 RNF26Q9BY78 433 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MAF1Q9H063 256 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 GBA2Q9HCG7 927 aaPredicted RBP7.27□□□□□ -1.25
CBWD3-210ENST00000614398 MAD2L2Q9UI95 211 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 CSADQ9Y600 493 aa7.27□□□□□ -1.25
CBWD3-210ENST00000614398 A0A1W2PRG0 241 aa7.26□□□□□ -1.25
CBWD3-210ENST00000614398 WDR46O15213 610 aaKnown RBP7.26□□□□□ -1.25
CBWD3-210ENST00000614398 PRPF3O43395 683 aaKnown RBP7.26□□□□□ -1.25
CBWD3-210ENST00000614398 TOMM70O94826 608 aa7.26□□□□□ -1.25
CBWD3-210ENST00000614398 FMNL1O95466 1100 aaPredicted RBP7.26□□□□□ -1.25
CBWD3-210ENST00000614398 SLURP2P0DP57 97 aa7.26□□□□□ -1.25
CBWD3-210ENST00000614398 FDX1P10109 184 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms