RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 GPAA1O43292 621 aa27.23■■□□□ 1.95
FAM228B-208ENST00000613899 FARP2O94887 1054 aaPredicted RBP27.23■■□□□ 1.95
FAM228B-208ENST00000613899 RGS2P41220 211 aa27.23■■□□□ 1.95
FAM228B-208ENST00000613899 OTUD7AQ8TE49 926 aaPredicted RBP27.23■■□□□ 1.95
FAM228B-208ENST00000613899 ROBO3Q96MS0 1386 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 RPTORQ8N122 1335 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 SLC34A2O95436 690 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 COG2Q14746 738 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 MORN1Q5T089 497 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 CLEC10AQ8IUN9 316 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 APBA2Q99767 749 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 FSD1Q9BTV5 496 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 HTATIP2Q9BUP3 242 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 VCPKMTQ9H867 229 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 HMX1Q9NP08 348 aaPredicted RBP27.22■■□□□ 1.95
FAM228B-208ENST00000613899 HOXC10Q9NYD6 342 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 RLFQ13129 1914 aa27.22■■□□□ 1.95
FAM228B-208ENST00000613899 GREB1LQ9C091 1923 aaPredicted RBP27.22■■□□□ 1.95
FAM228B-208ENST00000613899 TFRCP02786 760 aaKnown RBP27.21■■□□□ 1.95
FAM228B-208ENST00000613899 ZKSCAN1P17029 563 aaPredicted RBP27.21■■□□□ 1.95
FAM228B-208ENST00000613899 HDAC1Q13547 482 aaPredicted RBP27.21■■□□□ 1.95
FAM228B-208ENST00000613899 AAMPQ13685 434 aa27.21■■□□□ 1.95
FAM228B-208ENST00000613899 USP6NLQ92738 828 aa27.21■■□□□ 1.95
FAM228B-208ENST00000613899 KANSL2Q9H9L4 492 aa27.21■■□□□ 1.95
FAM228B-208ENST00000613899 BTBD7Q9P203 1132 aa27.21■■□□□ 1.95
FAM228B-208ENST00000613899 WDR78Q5VTH9 848 aa27.2■■□□□ 1.94
FAM228B-208ENST00000613899 SIAH1Q8IUQ4 282 aa27.2■■□□□ 1.94
FAM228B-208ENST00000613899 CRISPLD2Q9H0B8 497 aa27.2■■□□□ 1.94
FAM228B-208ENST00000613899 IVNS1ABPQ9Y6Y0 642 aa27.2■■□□□ 1.94
FAM228B-208ENST00000613899 PARP14Q460N5 1801 aa27.2■■□□□ 1.94
FAM228B-208ENST00000613899 SALL3Q9BXA9 1300 aa27.19■■□□□ 1.94
FAM228B-208ENST00000613899 M0R2C6 588 aa27.19■■□□□ 1.94
FAM228B-208ENST00000613899 WDR46O15213 610 aaKnown RBP27.19■■□□□ 1.94
FAM228B-208ENST00000613899 TDO2P48775 406 aa27.19■■□□□ 1.94
FAM228B-208ENST00000613899 ANKRD45Q5TZF3 282 aa27.19■■□□□ 1.94
FAM228B-208ENST00000613899 MB21D1Q8N884 522 aa27.19■■□□□ 1.94
FAM228B-208ENST00000613899 EPB41L4AQ9HCS5 686 aaPredicted RBP27.19■■□□□ 1.94
FAM228B-208ENST00000613899 EEF2P13639 858 aaKnown RBP27.18■■□□□ 1.94
FAM228B-208ENST00000613899 TRIM32Q13049 653 aa27.18■■□□□ 1.94
FAM228B-208ENST00000613899 MAP2K5Q13163 448 aa27.18■■□□□ 1.94
FAM228B-208ENST00000613899 KIAA1755Q5JYT7 1200 aa27.18■■□□□ 1.94
FAM228B-208ENST00000613899 MAP3K21Q5TCX8 1036 aa27.18■■□□□ 1.94
FAM228B-208ENST00000613899 SPICE1Q8N0Z3 855 aa27.18■■□□□ 1.94
FAM228B-208ENST00000613899 SLC15A5A6NIM6 579 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 MINDY4BA8MYZ0 360 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 FLOT1O75955 427 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 APPP05067 770 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 PRKAR2AP13861 404 aaKnown RBP27.17■■□□□ 1.94
FAM228B-208ENST00000613899 ATP2B2Q01814 1243 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 DPF3Q92784 378 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 NACAP1Q9BZK3 213 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 MKNK2Q9HBH9 465 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 ZNF287Q9HBT7 754 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 GOPCQ9HD26 462 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 ZNF236Q9UL36 1845 aa27.17■■□□□ 1.94
FAM228B-208ENST00000613899 PTPREP23469 700 aa27.16■■□□□ 1.94
FAM228B-208ENST00000613899 ANKLE1Q8NAG6 615 aa27.16■■□□□ 1.94
FAM228B-208ENST00000613899 CEP290O15078 2479 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 PATL2C9JE40 543 aaKnown RBP27.15■■□□□ 1.94
FAM228B-208ENST00000613899 RASA1P20936 1047 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 DSG3P32926 999 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 GRB14Q14449 540 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 ZMYM1Q5SVZ6 1142 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 SPATC1LQ9H0A9 340 aa27.15■■□□□ 1.94
FAM228B-208ENST00000613899 CCL14Q16627 93 aa27.14■■□□□ 1.94
FAM228B-208ENST00000613899 IFNL3Q8IZI9 196 aa27.14■■□□□ 1.94
FAM228B-208ENST00000613899 SHCBP1Q8NEM2 672 aa27.14■■□□□ 1.94
FAM228B-208ENST00000613899 SEC62Q99442 399 aaKnown RBP27.14■■□□□ 1.94
FAM228B-208ENST00000613899 MOV10L1Q9BXT6 1211 aaKnown RBP27.14■■□□□ 1.94
FAM228B-208ENST00000613899 STK11IPQ8N1F8 1099 aa27.13■■□□□ 1.93
FAM228B-208ENST00000613899 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.13■■□□□ 1.93
FAM228B-208ENST00000613899 STAP2Q9UGK3 403 aa27.13■■□□□ 1.93
FAM228B-208ENST00000613899 H0YGN5 161 aa27.12■■□□□ 1.93
FAM228B-208ENST00000613899 HOXC6P09630 235 aa27.12■■□□□ 1.93
FAM228B-208ENST00000613899 CACNB2Q08289 660 aaPredicted RBP27.12■■□□□ 1.93
FAM228B-208ENST00000613899 EVI5LQ96CN4 794 aa27.12■■□□□ 1.93
FAM228B-208ENST00000613899 ATG4CQ96DT6 458 aa27.12■■□□□ 1.93
FAM228B-208ENST00000613899 MYH4Q9Y623 1939 aa27.12■■□□□ 1.93
FAM228B-208ENST00000613899 COL11A1P12107 1806 aaPredicted RBP27.11■■□□□ 1.93
FAM228B-208ENST00000613899 STRNO43815 780 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 PDE1AP54750 535 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 MFSD14CQ5VZR4 134 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 NECAB2Q7Z6G3 386 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 NAPBQ9H115 298 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 NYAP2Q9P242 653 aa27.11■■□□□ 1.93
FAM228B-208ENST00000613899 RAD21O60216 631 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 SLC3A2P08195 630 aaKnown RBP27.1■■□□□ 1.93
FAM228B-208ENST00000613899 ERCC3P19447 782 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 PLS1Q14651 629 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 ZNF444Q8N0Y2 327 aaPredicted RBP27.1■■□□□ 1.93
FAM228B-208ENST00000613899 PAWRQ96IZ0 340 aaKnown RBP27.1■■□□□ 1.93
FAM228B-208ENST00000613899 MROH8Q9H579 483 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 OGDHLQ9ULD0 1010 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 NR2E3Q9Y5X4 410 aa27.1■■□□□ 1.93
FAM228B-208ENST00000613899 PDE4BQ07343 736 aa27.09■■□□□ 1.93
FAM228B-208ENST00000613899 HABP4Q5JVS0 413 aaKnown RBP27.09■■□□□ 1.93
FAM228B-208ENST00000613899 SAMD1Q6SPF0 538 aaPredicted RBP27.09■■□□□ 1.93
FAM228B-208ENST00000613899 FRMPD3Q5JV73 1810 aa27.09■■□□□ 1.93
FAM228B-208ENST00000613899 ADORA2AP29274 412 aa27.08■■□□□ 1.93
FAM228B-208ENST00000613899 DIS3LQ8TF46 1054 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms