RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TTC1Q99614 292 aa5.46□□□□□ -1.54
VPS13D-213ENST00000613099 GORASP1Q9BQQ3 440 aa5.46□□□□□ -1.54
VPS13D-213ENST00000613099 FGFR1OP2Q9NVK5 253 aa5.46□□□□□ -1.54
VPS13D-213ENST00000613099 RALGAPBQ86X10 1494 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 A0A0G2JS52 829 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 I3L4J1 428 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 KCNA2P16389 499 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ZNF449Q6P9G9 518 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 HNRNPCL1O60812 293 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 S100BP04271 92 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 PRR29P0C7W0 189 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 EIF3BP55884 814 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 UBXN1Q04323 297 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TMEM259Q4ZIN3 620 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 RHBDL2Q9NX52 303 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 MAPKBP1O60336 1514 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 IRAK1P51617 712 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 NLRP12P59046 1061 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 PPP4R3AQ6IN85 833 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 SNX29Q8TEQ0 813 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC138Q96M89 665 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 LLPHQ9BRT6 129 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TPCN1Q9ULQ1 816 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ATP8A1Q9Y2Q0 1164 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 STK24Q9Y6E0 443 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ATXN10Q9UBB4 475 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TMCO1Q9UM00 188 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CHD4Q14839 1912 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CARNS1A5YM72 827 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ECM2O94769 699 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 NR1D1P20393 614 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 MTIF2P46199 727 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 EPHB4P54760 987 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ARPC4P59998 168 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TSPAN18Q96SJ8 248 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 RBM42Q9BTD8 480 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 RAB17Q9H0T7 212 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 SLC40A1Q9NP59 571 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TRAPPC8Q9Y2L5 1435 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 SPTLC2O15270 562 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 P4HA2O15460 535 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC159P0C7I6 412 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 MYH6P13533 1939 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD20A3Q5VUR7 823 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CARMIL3Q8ND23 1372 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 RAD21O60216 631 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 GGCXP38435 758 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 NLRP9Q7RTR0 991 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ZNF713Q8N859 430 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 KDM4CQ9H3R0 1056 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 SEC63Q9UGP8 760 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 PHEXP78562 749 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CALCOCO2Q13137 446 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 NBPF15Q8N660 670 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CFAP36Q96G28 342 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 DYDC2Q96IM9 177 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 GMEB1Q9Y692 573 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ABLIM1O14639 778 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 APOEP02649 317 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 CTNNA1P35221 906 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 MTX1Q13505 466 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 NLRP14Q86W24 1093 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 EZH1Q92800 747 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 SH3GL1Q99961 368 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 DNA2P51530 1060 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 KIFAP3Q92845 792 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ZCCHC11Q5TAX3 1644 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 WDR46O15213 610 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 POLR2EP19388 210 aaKnown RBP5.45□□□□□ -1.54
VPS13D-213ENST00000613099 PAX3P23760 479 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 OCA2Q04671 838 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 DMPKQ09013 629 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 TXNDC9O14530 226 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 RGL2O15211 777 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ESYT1Q9BSJ8 1104 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 ST7Q9NRC1 585 aa5.45□□□□□ -1.54
VPS13D-213ENST00000613099 BICDL2A1A5D9 508 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CUL1Q13616 776 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 HEATR3Q7Z4Q2 680 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ARL10Q8N8L6 244 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 BTBD7Q9P203 1132 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 SH3GLB1Q9Y371 365 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 FGD6Q6ZV73 1430 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANKRD26Q9UPS8 1709 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 MAPK13O15264 365 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CASP14P31944 242 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 UBE2Q1Q7Z7E8 422 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 NDEL1Q9GZM8 345 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 KRT38O76015 456 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ATP8B2P98198 1209 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 CCDC153Q494R4 210 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 NR1H4Q96RI1 486 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 XPO4Q9C0E2 1151 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 ANP32DO95626 131 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 GUCY1B3Q02153 619 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 KLC3Q6P597 504 aa5.44□□□□□ -1.54
VPS13D-213ENST00000613099 TBC1D1Q86TI0 1168 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-213ENST00000613099 NUDCD3Q8IVD9 361 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms