RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PHF21AQ96BD5 680 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RNPEPQ9H4A4 650 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SAMD15Q9P1V8 674 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CNPY2Q9Y2B0 182 aa11.93□□□□□ -0.5
CNTNAP3B-211ENST00000612828 BTBD11A6QL63 1104 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MYL1P05976 194 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 DDIT3P35638 169 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CWF19L2Q2TBE0 894 aaKnown RBP11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 WASF1Q92558 559 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PYGBP11216 843 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 NAPBQ9H115 298 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZBTB40Q9NUA8 1239 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SERPINB6P35237 376 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PRKCQQ04759 706 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FAM76AQ8TAV0 307 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MAGEB10Q96LZ2 347 aaPredicted RBP11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SCYL2Q6P3W7 929 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 OSCP1Q8WVF1 389 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 GNAT3A8MTJ3 354 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 BFSP1Q12934 665 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 HDDC2Q7Z4H3 204 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CTAGE3PQ8IX95 158 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT222Q8N1A0 295 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 LRGUKQ96M69 825 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MYD88Q99836 296 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZSCAN12O43309 604 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ANKRD1Q15327 319 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FAM8A1Q9UBU6 413 aa11.92□□□□□ -0.5
CNTNAP3B-211ENST00000612828 EEF1DP29692 281 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IGSF3O75054 1194 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PDE1AP54750 535 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 STRN3Q13033 797 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PUM3Q15397 648 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT39Q6A163 491 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PAPOLAP51003 745 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARSJQ5FYB0 599 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ITPRIPL1Q6GPH6 555 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RUFY4Q6ZNE9 571 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RAPGEF5Q92565 580 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CARD10Q9BWT7 1032 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 IMPDH2P12268 514 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CAPRIN1Q14444 709 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 APPL2Q8NEU8 664 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 HLA-DOAP06340 250 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ZNF18P17022 549 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT15P19012 456 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ARPP19P56211 112 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPP1R42Q7Z4L9 355 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 LMNTD2Q8IXW0 634 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KLHL25Q9H0H3 589 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ABT1Q9ULW3 272 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PRR23D1E9PI22 279 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PRR23D2P0DMB1 279 aaPredicted RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KRT2P35908 639 aa11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 COPG1Q9Y678 874 aaKnown RBP11.91□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SMARCA1P28370 1054 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 ATL2Q8NHH9 583 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 Q3C1V9 767 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 RAPH1Q70E73 1250 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 SLC4A7Q9Y6M7 1214 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 E9PMD0 336 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TIPRLO75663 272 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 MFSD4BQ5TF39 518 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 EPAS1Q99814 870 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PTCD1O75127 700 aaKnown RBP11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PRDM1O75626 825 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CLUP10909 449 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 CCT2P78371 535 aaKnown RBP11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KARSQ15046 597 aaKnown RBP11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 KIF18AQ8NI77 898 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PPWD1Q96BP3 646 aaKnown RBP11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PLCB1Q9NQ66 1216 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 VAMP4O75379 141 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 TRPC4Q9UBN4 977 aa11.9□□□□□ -0.5
CNTNAP3B-211ENST00000612828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.9□□□□□ -0.51
CNTNAP3B-211ENST00000612828 ECE1P42892 770 aa11.9□□□□□ -0.51
CNTNAP3B-211ENST00000612828 E4F1Q66K89 784 aaPredicted RBP11.9□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PGBD3Q8N328 593 aa11.9□□□□□ -0.51
CNTNAP3B-211ENST00000612828 SNX21Q969T3 373 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms