RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 CATSPERGQ6ZRH7 1159 aa21.47■■□□□ 1.03
SEMA3B-211ENST00000612509 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
SEMA3B-211ENST00000612509 MORF4L1Q9UBU8 362 aa21.47■■□□□ 1.03
SEMA3B-211ENST00000612509 PTCH2Q9Y6C5 1203 aa21.47■■□□□ 1.03
SEMA3B-211ENST00000612509 RLFQ13129 1914 aa21.47■■□□□ 1.03
SEMA3B-211ENST00000612509 HTTP42858 3142 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 CCDC85CA6NKD9 419 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 FMNL1O95466 1100 aaPredicted RBP21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 TSPY3P0CV98 308 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 TSPY8P0CW00 308 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 SPICE1Q8N0Z3 855 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 NEDD1Q8NHV4 660 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 TANGO6Q9C0B7 1094 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 NYAP2Q9P242 653 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 TACC3Q9Y6A5 838 aa21.46■■□□□ 1.03
SEMA3B-211ENST00000612509 WDR46O15213 610 aaKnown RBP21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 PRMT2P55345 433 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 HAND2P61296 217 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 CEP95Q96GE4 821 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 DSCC1Q9BVC3 393 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 TXNRD2Q9NNW7 524 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 SRRDQ9UH36 339 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 MYPNQ86TC9 1320 aa21.45■■□□□ 1.02
SEMA3B-211ENST00000612509 SPDYE16A6NNV3 312 aaPredicted RBP21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 TNPO2O14787 897 aaKnown RBP21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 ORC4O43929 436 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 PEX10O60683 326 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 FGRP09769 529 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 CHMLP26374 656 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 TFAP4Q01664 338 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 PAGR1Q9BTK6 254 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 INCENPQ9NQS7 918 aa21.44■■□□□ 1.02
SEMA3B-211ENST00000612509 TSPY2A6NKD2 308 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 HOXD10P28358 340 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 PRKCZQ05513 592 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 POTEEQ6S8J3 1075 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 LBX2Q6XYB7 198 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 TBC1D10CQ8IV04 446 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 RUFY2Q8WXA3 655 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 MTMR4Q9NYA4 1195 aa21.43■■□□□ 1.02
SEMA3B-211ENST00000612509 TTLL1O95922 423 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 ERVK-9P63128 1117 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 ERVK-24P63145 666 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 GPRC5AQ8NFJ5 357 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 STAG1Q8WVM7 1258 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 TOMM22Q9NS69 142 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 RBPJLQ9UBG7 517 aa21.42■■□□□ 1.02
SEMA3B-211ENST00000612509 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 RAD21O60216 631 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 RANBP6O60518 1105 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 CNMDO75829 334 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 RRP12Q5JTH9 1297 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 LRRC47Q8N1G4 583 aaKnown RBP21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 CLIP2Q9UDT6 1046 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 SYNPO2Q9UMS6 1093 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
SEMA3B-211ENST00000612509 NEDD4P46934 1319 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 FLOT1O75955 427 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 NDUFB10O96000 172 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 PCP11498 1178 aaKnown RBP21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 COG2Q14746 738 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 SLC9C1Q4G0N8 1177 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 AKNAD1Q5T1N1 836 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 ARMC5Q96C12 935 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 RNF41Q9H4P4 317 aaPredicted RBP21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 GABRQQ9UN88 632 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 PLXNB2O15031 1838 aa21.4■■□□□ 1.02
SEMA3B-211ENST00000612509 ZNF213O14771 459 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 SGSM2O43147 1006 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 BMP2KLQ5H9B9 411 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 PPP4R3BQ5MIZ7 849 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 FAM83BQ5T0W9 1011 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 RAET1EQ8TD07 263 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 MKL1Q969V6 931 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 COA7Q96BR5 231 aa21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 COL11A1P12107 1806 aaPredicted RBP21.39■■□□□ 1.01
SEMA3B-211ENST00000612509 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 F5H6K3 240 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 NMT2O60551 498 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 DSG3P32926 999 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 KLRC3Q07444 240 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 IMMTQ16891 758 aaKnown RBP21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 Q3C1V9 767 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 GMCL1P1Q8NEA9 526 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 PORCNQ9H237 461 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 IL17RBQ9NRM6 502 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 BTBD7Q9P203 1132 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 CTNNA3Q9UI47 895 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 STX8Q9UNK0 236 aa21.38■■□□□ 1.01
SEMA3B-211ENST00000612509 FLT3LGP49771 235 aa21.37■■□□□ 1.01
SEMA3B-211ENST00000612509 SOX10P56693 466 aa21.37■■□□□ 1.01
SEMA3B-211ENST00000612509 ATG4CQ96DT6 458 aa21.37■■□□□ 1.01
SEMA3B-211ENST00000612509 ZNF333Q96JL9 665 aa21.37■■□□□ 1.01
SEMA3B-211ENST00000612509 FBXO28Q9NVF7 368 aa21.37■■□□□ 1.01
SEMA3B-211ENST00000612509 HOXC10Q9NYD6 342 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms