RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 TM4SF1P30408 202 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 TAF7Q15545 349 aaPredicted RBP10.12□□□□□ -0.79
FAM228B-205ENST00000611127 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 NPM2Q86SE8 214 aaKnown RBP10.12□□□□□ -0.79
FAM228B-205ENST00000611127 DZIP1LQ8IYY4 767 aaKnown RBP10.12□□□□□ -0.79
FAM228B-205ENST00000611127 KLHL23Q8NBE8 558 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 ADAM19Q9H013 955 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 RASSF4Q9H2L5 321 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 SALL4Q9UJQ4 1053 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 UBR3Q6ZT12 1888 aa10.12□□□□□ -0.79
FAM228B-205ENST00000611127 UTRNP46939 3433 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 MYBBP1AQ9BQG0 1328 aaKnown RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 MAPK8IP3Q9UPT6 1336 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 KCNQ3O43525 872 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 CYP2E1P05181 493 aaPredicted RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 IL6STP40189 918 aaPredicted RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 NFE2L2Q16236 605 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 XP32Q5T750 250 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 Q6ZS46 218 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
FAM228B-205ENST00000611127 WNT8BQ93098 351 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 COL15A1P39059 1388 aa10.11□□□□□ -0.79
FAM228B-205ENST00000611127 SNRPA1P09661 255 aaKnown RBP10.1□□□□□ -0.79
FAM228B-205ENST00000611127 LACRTQ9GZZ8 138 aa10.1□□□□□ -0.79
FAM228B-205ENST00000611127 CNTN3Q9P232 1028 aa10.1□□□□□ -0.79
FAM228B-205ENST00000611127 CICQ96RK0 1608 aaPredicted RBP10.1□□□□□ -0.79
FAM228B-205ENST00000611127 A0A0G2JLW4 131 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 POLRMTO00411 1230 aaKnown RBP10.09□□□□□ -0.79
FAM228B-205ENST00000611127 A1BGP04217 495 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 CD68P34810 354 aaPredicted RBP10.09□□□□□ -0.79
FAM228B-205ENST00000611127 DDR1Q08345 913 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 AAMPQ13685 434 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 NFIXQ14938 502 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 MEGF10Q96KG7 1140 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 EGFL7Q9UHF1 273 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 USP16Q9Y5T5 823 aa10.09□□□□□ -0.79
FAM228B-205ENST00000611127 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
FAM228B-205ENST00000611127 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 TJP1Q07157 1748 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 BRD1O95696 1058 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 DPEP1P16444 411 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
FAM228B-205ENST00000611127 SNX29Q8TEQ0 813 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
FAM228B-205ENST00000611127 MIS18AQ9NYP9 233 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
FAM228B-205ENST00000611127 PXDNLA1KZ92 1463 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 FSCN2O14926 492 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 SERPINB2P05120 415 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 RIPK4P57078 832 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 WDR43Q15061 677 aaKnown RBP eCLIP10.07□□□□□ -0.8
FAM228B-205ENST00000611127 C1orf127Q8N9H9 656 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 POP1Q99575 1024 aaKnown RBP10.07□□□□□ -0.8
FAM228B-205ENST00000611127 CEP41Q9BYV8 373 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 DZANK1Q9NVP4 752 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 PIM2Q9P1W9 311 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 POLIQ9UNA4 740 aa10.07□□□□□ -0.8
FAM228B-205ENST00000611127 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 H3BRJ5 948 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 EDN3P14138 238 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 KCNA3P22001 575 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 MTMR3Q13615 1198 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 PRR23CQ6ZRP0 262 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 OSGEPQ9NPF4 335 aa10.06□□□□□ -0.8
FAM228B-205ENST00000611127 PDE2AO00408 941 aaPredicted RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 EPHA1P21709 976 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 TMPOP42166 694 aaKnown RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 EIF4A1P60842 406 aaKnown RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 KCNA1Q09470 495 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 UVSSAQ2YD98 709 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 DALRD3Q5D0E6 543 aaKnown RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 CLEC4GQ6UXB4 293 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 GALNT11Q8NCW6 608 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 RUNDC1Q96C34 613 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
FAM228B-205ENST00000611127 SEC31BQ9NQW1 1179 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
FAM228B-205ENST00000611127 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
FAM228B-205ENST00000611127 SCO2A0A1W2PP80 73 aa10.04□□□□□ -0.8
FAM228B-205ENST00000611127 PHACTR2O75167 634 aa10.04□□□□□ -0.8
FAM228B-205ENST00000611127 TNFRSF21O75509 655 aa10.04□□□□□ -0.8
FAM228B-205ENST00000611127 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
FAM228B-205ENST00000611127 ARHGAP27Q6ZUM4 889 aa10.04□□□□□ -0.8
FAM228B-205ENST00000611127 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
FAM228B-205ENST00000611127 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
FAM228B-205ENST00000611127 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms