RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 SWAP70Q9UH65 585 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 TNPO2O14787 897 aaKnown RBP10.35□□□□□ -0.75
SNCA-212ENST00000611107 ADCY3O60266 1144 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 SDSP20132 328 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 GRK4P32298 578 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 ERVK-24P63145 666 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 ICA1Q05084 483 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 CCL14Q16627 93 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 USP6NLQ92738 828 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 RILPL2Q969X0 211 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
SNCA-212ENST00000611107 PNMA3Q9UL41 463 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNCA-212ENST00000611107 TMX2Q9Y320 296 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 MYH6P13533 1939 aa10.35□□□□□ -0.75
SNCA-212ENST00000611107 NMT2O60551 498 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 APPP05067 770 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 CCL5P13501 91 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 GCLCP48506 637 aaPredicted RBP10.34□□□□□ -0.75
SNCA-212ENST00000611107 TDO2P48775 406 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 ATP2B2Q01814 1243 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 PPARAQ07869 468 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 TRIB2Q92519 343 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 VCPKMTQ9H867 229 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 FLRT1Q9NZU1 646 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
SNCA-212ENST00000611107 GNRH1P01148 92 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 INHAP05111 366 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 CYP2B6P20813 491 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 USP14P54578 494 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 PABPC4Q13310 644 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNCA-212ENST00000611107 LRRFIP1Q32MZ4 808 aaKnown RBP10.33□□□□□ -0.76
SNCA-212ENST00000611107 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 FAM83BQ5T0W9 1011 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
SNCA-212ENST00000611107 GPR142Q7Z601 462 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
SNCA-212ENST00000611107 GPRC5AQ8NFJ5 357 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 CCDC17Q96LX7 622 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 IL17RBQ9NRM6 502 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
SNCA-212ENST00000611107 CEP290O15078 2479 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 MCM3APO60318 1980 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 FGAP02671 866 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 HSPD1P10809 573 aaKnown RBP10.32□□□□□ -0.76
SNCA-212ENST00000611107 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
SNCA-212ENST00000611107 DSG3P32926 999 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 PRMT2P55345 433 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 HAND2P61296 217 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 IRF5Q13568 498 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 MORN1Q5T089 497 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 LBX2Q6XYB7 198 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 REPS2Q8NFH8 660 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 NPLOC4Q8TAT6 608 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 MOV10L1Q9BXT6 1211 aaKnown RBP10.32□□□□□ -0.76
SNCA-212ENST00000611107 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 HELLSQ9NRZ9 838 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 RABGAP1Q9Y3P9 1069 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
SNCA-212ENST00000611107 NDUFB10O96000 172 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 IGHA2P01877 340 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 GNAT2P19087 354 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 HOXD10P28358 340 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
SNCA-212ENST00000611107 COG2Q14746 738 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 MCMDC2Q4G0Z9 681 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 UBE2Q1Q7Z7E8 422 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 NEDD1Q8NHV4 660 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 COA7Q96BR5 231 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 NAPBQ9H115 298 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 KANSL2Q9H9L4 492 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 MKNK2Q9HBH9 465 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 NYAP2Q9P242 653 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 LCTP09848 1927 aa10.31□□□□□ -0.76
SNCA-212ENST00000611107 RAD50Q92878 1312 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms