RNA–Protein interactions for RNA: ENST00000610096.1

SYT6-207, Transcript of synaptotagmin 6, humanhuman

TSL 1 (best)

Gene SYT6, Length 1,897 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT6-207ENST00000610096 CCDC178Q5BJE1 867 aa27.35■■□□□ 1.97
SYT6-207ENST00000610096 CATIPQ7Z7H3 387 aa27.35■■□□□ 1.97
SYT6-207ENST00000610096 GBA2Q9HCG7 927 aaPredicted RBP27.35■■□□□ 1.97
SYT6-207ENST00000610096 NYAP2Q9P242 653 aa27.35■■□□□ 1.97
SYT6-207ENST00000610096 CSADQ9Y600 493 aa27.35■■□□□ 1.97
SYT6-207ENST00000610096 TROAPQ12815 778 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 ARMC9Q7Z3E5 817 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 TMTC2Q8N394 836 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 SLKQ9H2G2 1235 aaPredicted RBP27.34■■□□□ 1.97
SYT6-207ENST00000610096 CDC27P30260 824 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 METAP2P50579 478 aaKnown RBP eCLIP27.34■■□□□ 1.97
SYT6-207ENST00000610096 MAP3K11Q16584 847 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 KIAA1755Q5JYT7 1200 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 NOL9Q5SY16 702 aaKnown RBP27.34■■□□□ 1.97
SYT6-207ENST00000610096 SPICE1Q8N0Z3 855 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 CMTR1Q8N1G2 835 aaKnown RBP27.34■■□□□ 1.97
SYT6-207ENST00000610096 ZNF274Q96GC6 653 aaPredicted RBP27.34■■□□□ 1.97
SYT6-207ENST00000610096 ZHX2Q9Y6X8 837 aa27.34■■□□□ 1.97
SYT6-207ENST00000610096 BAZ2BQ9UIF8 2168 aaKnown RBP27.33■■□□□ 1.97
SYT6-207ENST00000610096 GOLGA8AA7E2F4 631 aa27.33■■□□□ 1.97
SYT6-207ENST00000610096 USP17L5A8MUK1 530 aa27.33■■□□□ 1.97
SYT6-207ENST00000610096 BECN1Q14457 450 aa27.33■■□□□ 1.97
SYT6-207ENST00000610096 ANKRD13AQ8IZ07 590 aa27.33■■□□□ 1.97
SYT6-207ENST00000610096 SMC1BQ8NDV3 1235 aa27.33■■□□□ 1.97
SYT6-207ENST00000610096 PASKQ96RG2 1323 aa27.33■■□□□ 1.96
SYT6-207ENST00000610096 TRIM75PA6NK02 468 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 PFKFB2O60825 505 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 GOLGA8HP0CJ92 632 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 ADD1P35611 737 aaKnown RBP27.32■■□□□ 1.96
SYT6-207ENST00000610096 SYNE3Q6ZMZ3 975 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 GTF3C6Q969F1 213 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 ARHGEF10LQ9HCE6 1279 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 ZSCAN31Q96LW9 406 aaPredicted RBP27.32■■□□□ 1.96
SYT6-207ENST00000610096 NUP88Q99567 741 aaPredicted RBP27.32■■□□□ 1.96
SYT6-207ENST00000610096 FEZ1Q99689 392 aa27.32■■□□□ 1.96
SYT6-207ENST00000610096 FAM217BQ9NTX9 383 aaPredicted RBP27.32■■□□□ 1.96
SYT6-207ENST00000610096 FRMPD2Q68DX3 1309 aaPredicted RBP27.31■■□□□ 1.96
SYT6-207ENST00000610096 PTPRFP10586 1907 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 TOMM70O94826 608 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 SPP2Q13103 211 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 MTMR2Q13614 643 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 USP17L2Q6R6M4 530 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 MKL1Q969V6 931 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 OTUD5Q96G74 571 aa27.31■■□□□ 1.96
SYT6-207ENST00000610096 LDLRAD1Q5T700 205 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 STAG2Q8N3U4 1231 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 CCDC82Q8N4S0 544 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 CPVLQ9H3G5 476 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 SH2B1Q9NRF2 756 aaPredicted RBP27.3■■□□□ 1.96
SYT6-207ENST00000610096 DDAH1O94760 285 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 C2orf69Q8N8R5 385 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 FANCBQ8NB91 859 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 ISY1Q9ULR0 285 aaKnown RBP27.3■■□□□ 1.96
SYT6-207ENST00000610096 TMX2Q9Y320 296 aa27.3■■□□□ 1.96
SYT6-207ENST00000610096 F5H6K3 240 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 PLEKHA8P1O95397 391 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 PDHBP11177 359 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 KLRC3Q07444 240 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 RTN1Q16799 776 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 IL27Q8NEV9 243 aa27.29■■□□□ 1.96
SYT6-207ENST00000610096 NDUFB10O96000 172 aa27.28■■□□□ 1.96
SYT6-207ENST00000610096 RBM46Q8TBY0 533 aaKnown RBP27.28■■□□□ 1.96
SYT6-207ENST00000610096 SLFN13Q68D06 897 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 KCTD1Q719H9 257 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 ZNF280CQ8ND82 737 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 GINM1Q9NU53 330 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 MAD2L2Q9UI95 211 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 JAK2O60674 1132 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 CTDNEP1O95476 244 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 MKRN3Q13064 507 aaKnown RBP27.27■■□□□ 1.96
SYT6-207ENST00000610096 OPTNQ96CV9 577 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 AFG3L2Q9Y4W6 797 aa27.27■■□□□ 1.96
SYT6-207ENST00000610096 GJA5P36382 358 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 CUL4AQ13619 759 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 GRM4Q14833 912 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 CCDC96Q2M329 555 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 PPP4R3BQ5MIZ7 849 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 NBPF11Q86T75 865 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 CTCFLQ8NI51 663 aaPredicted RBP27.26■■□□□ 1.95
SYT6-207ENST00000610096 GPCPD1Q9NPB8 672 aa27.26■■□□□ 1.95
SYT6-207ENST00000610096 IRF6O14896 467 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 HSP90AA1P07900 732 aaKnown RBP27.25■■□□□ 1.95
SYT6-207ENST00000610096 HUNKP57058 714 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 PHKBQ93100 1093 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 AS3MTQ9HBK9 375 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 NID2Q14112 1375 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 USP17L10C9JJH3 530 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 HMGCS2P54868 508 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 FKBP1BP68106 108 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 TTBK2Q6IQ55 1244 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 GMCL1P1Q8NEA9 526 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 WDR18Q9BV38 432 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 VCPKMTQ9H867 229 aa27.25■■□□□ 1.95
SYT6-207ENST00000610096 MYH6P13533 1939 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 SPDYE5A6NIY4 337 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 CALM1P0DP23 149 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 CALM2P0DP24 149 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 CALM3P0DP25 149 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 SLC1A4P43007 532 aa27.24■■□□□ 1.95
SYT6-207ENST00000610096 PIBF1Q8WXW3 757 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms