RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 TMEM67Q5HYA8 995 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 IFIT1BQ5T764 474 aaKnown RBP10.4□□□□□ -0.74
ITGB5-212ENST00000608657 RUFY3Q7L099 469 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 DGKHQ86XP1 1220 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 LRRC47Q8N1G4 583 aaKnown RBP10.4□□□□□ -0.74
ITGB5-212ENST00000608657 ENAHQ8N8S7 591 aaPredicted RBP10.4□□□□□ -0.74
ITGB5-212ENST00000608657 ACER1Q8TDN7 264 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 CAPNS2Q96L46 248 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 TCEANC2Q96MN5 208 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 TTC14Q96N46 770 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 UPF3BQ9BZI7 483 aaKnown RBP10.4□□□□□ -0.74
ITGB5-212ENST00000608657 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
ITGB5-212ENST00000608657 KAT14Q9H8E8 782 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 ZSWIM6Q9HCJ5 1215 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 CLIP2Q9UDT6 1046 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 KCNH4Q9UQ05 1017 aa10.4□□□□□ -0.74
ITGB5-212ENST00000608657 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.75
ITGB5-212ENST00000608657 CCL15-CCL14A0A0B4J2E2 113 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 A0A0G2JLL6 359 aaPredicted RBP10.39□□□□□ -0.75
ITGB5-212ENST00000608657 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 C19orf81C9J6K1 198 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 SH2B2O14492 632 aaPredicted RBP10.39□□□□□ -0.75
ITGB5-212ENST00000608657 CXCL11O14625 94 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 TOP1P11387 765 aaKnown RBP10.39□□□□□ -0.75
ITGB5-212ENST00000608657 GTF2A2P52657 109 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 HMGCS2P54868 508 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
ITGB5-212ENST00000608657 SEC23AQ15436 765 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 CCL15Q16663 113 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 RCSD1Q6JBY9 416 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 NFXL1Q6ZNB6 911 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 GADL1Q6ZQY3 521 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 PRRT2Q7Z6L0 340 aaPredicted RBP10.39□□□□□ -0.75
ITGB5-212ENST00000608657 IL17RAQ96F46 866 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 KIAA1683Q9H0B3 1180 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 TMOD4Q9NZQ9 345 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 SYNPO2Q9UMS6 1093 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
ITGB5-212ENST00000608657 MANSC4A6NHS7 340 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-212ENST00000608657 CCDC69A6NI79 296 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 FAM155AB1AL88 458 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-212ENST00000608657 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
ITGB5-212ENST00000608657 CETPP11597 493 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 NOVP48745 357 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 EXOSC10Q01780 885 aaKnown RBP10.38□□□□□ -0.75
ITGB5-212ENST00000608657 SREBF2Q12772 1141 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 NOGQ13253 232 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 SH3D19Q5HYK7 790 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 Q6ZUG5 572 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 SIAH1Q8IUQ4 282 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 PNMA1Q8ND90 353 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 MKL1Q969V6 931 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 LY9Q9HBG7 655 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 MTMR7Q9Y216 660 aa10.38□□□□□ -0.75
ITGB5-212ENST00000608657 WDR33Q9C0J8 1336 aaKnown RBP10.37□□□□□ -0.75
ITGB5-212ENST00000608657 LIFRP42702 1097 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 VEGFBP49765 207 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 NEK4P51957 841 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 DGKZQ13574 1117 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 SLFN13Q68D06 897 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 FASTKD5Q7L8L6 764 aaKnown RBP10.37□□□□□ -0.75
ITGB5-212ENST00000608657 CATIPQ7Z7H3 387 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 TMTC2Q8N394 836 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 PROCA1Q8NCQ7 364 aaPredicted RBP10.37□□□□□ -0.75
ITGB5-212ENST00000608657 GMCL1P1Q8NEA9 526 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 ANKS1AQ92625 1134 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 LPAR1Q92633 364 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 BRF1Q92994 677 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
ITGB5-212ENST00000608657 GPHNQ9NQX3 736 aaPredicted RBP10.37□□□□□ -0.75
ITGB5-212ENST00000608657 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 PARP14Q460N5 1801 aa10.37□□□□□ -0.75
ITGB5-212ENST00000608657 F5H6K3 240 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
ITGB5-212ENST00000608657 AOC2O75106 756 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 NDUFB10O96000 172 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 VCAM1P19320 739 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 NUCB2P80303 420 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 KIF23Q02241 960 aaPredicted RBP10.36□□□□□ -0.75
ITGB5-212ENST00000608657 KLRC3Q07444 240 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 PABPC4Q13310 644 aaKnown RBP eCLIP10.36□□□□□ -0.75
ITGB5-212ENST00000608657 CCDC96Q2M329 555 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 SYNE3Q6ZMZ3 975 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 SGMS1Q86VZ5 419 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 ZNF654Q8IZM8 581 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 DCAF4Q8WV16 495 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 BRI3BPQ8WY22 251 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 CHMP4CQ96CF2 233 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 MS4A4AQ96JQ5 239 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 KIF2CQ99661 725 aa10.36□□□□□ -0.75
ITGB5-212ENST00000608657 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms