RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 APPBP2Q92624 585 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 ARMC5Q96C12 935 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 GINM1Q9NU53 330 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 SRRDQ9UH36 339 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 MYPNQ86TC9 1320 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 KIAA0100Q14667 2235 aaKnown RBP12.42□□□□□ -0.42
LINC01001-203ENST00000607448 A0A1W2PRG0 241 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 C19orf81C9J6K1 198 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 MPHOSPH10O00566 681 aaKnown RBP12.42□□□□□ -0.42
LINC01001-203ENST00000607448 GPAA1O43292 621 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 AKR1B1P15121 316 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 SLC9C1Q4G0N8 1177 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 RUFY2Q8WXA3 655 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
LINC01001-203ENST00000607448 TXNRD2Q9NNW7 524 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 PNMA3Q9UL41 463 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 RAD50Q92878 1312 aa12.42□□□□□ -0.42
LINC01001-203ENST00000607448 SGSM2O43147 1006 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 BRD1O95696 1058 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 MBD3O95983 291 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
LINC01001-203ENST00000607448 CDK8P49336 464 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 FCGRTP55899 365 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 FAM110CQ1W6H9 321 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 GAS2L3Q86XJ1 694 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 STK11IPQ8N1F8 1099 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
LINC01001-203ENST00000607448 GNRH1P01148 92 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 VCAM1P19320 739 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 CLCN1P35523 988 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 HERVK_113P62684 666 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 ARHGEF6Q15052 776 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 USP17L2Q6R6M4 530 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 C16orf86Q6ZW13 317 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 FEZ1Q99689 392 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
LINC01001-203ENST00000607448 FOXP2O15409 715 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 MTFR1Q15390 333 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 Q3C1V9 767 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 ZMYM1Q5SVZ6 1142 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 TRIM44Q96DX7 344 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 KIAA1683Q9H0B3 1180 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 RRAGDQ9NQL2 400 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 ARPP21Q9UBL0 812 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 HIP1O00291 1037 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-203ENST00000607448 FLT3LGP49771 235 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 MORF4L1Q9UBU8 362 aa12.39□□□□□ -0.43
LINC01001-203ENST00000607448 MINDY4BA8MYZ0 360 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 CNMDO75829 334 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 ELNP15502 786 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-203ENST00000607448 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-203ENST00000607448 PRMT2P55345 433 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 PKP1Q13835 747 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 SBK1Q52WX2 424 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 CATSPERGQ6ZRH7 1159 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 TMEM179Q6ZVK1 233 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
LINC01001-203ENST00000607448 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01001-203ENST00000607448 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
LINC01001-203ENST00000607448 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
LINC01001-203ENST00000607448 HOXD10P28358 340 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 GRK4P32298 578 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 USP14P54578 494 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 ICA1Q05084 483 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 PORCNQ9H237 461 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 RPAP3Q9H6T3 665 aaPredicted RBP12.37□□□□□ -0.43
LINC01001-203ENST00000607448 DIAPH3Q9NSV4 1193 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
LINC01001-203ENST00000607448 FRMPD3Q5JV73 1810 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms