RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 SBK1Q52WX2 424 aa19.61■□□□□ 0.73
TUBE1-206ENST00000603722 LBX2Q6XYB7 198 aa19.61■□□□□ 0.73
TUBE1-206ENST00000603722 SPICE1Q8N0Z3 855 aa19.61■□□□□ 0.73
TUBE1-206ENST00000603722 LPAR1Q92633 364 aa19.61■□□□□ 0.73
TUBE1-206ENST00000603722 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.61■□□□□ 0.73
TUBE1-206ENST00000603722 TMX2Q9Y320 296 aa19.61■□□□□ 0.73
TUBE1-206ENST00000603722 APPP05067 770 aa19.6■□□□□ 0.73
TUBE1-206ENST00000603722 WDR78Q5VTH9 848 aa19.6■□□□□ 0.73
TUBE1-206ENST00000603722 SEC62Q99442 399 aaKnown RBP19.6■□□□□ 0.73
TUBE1-206ENST00000603722 VCPKMTQ9H867 229 aa19.6■□□□□ 0.73
TUBE1-206ENST00000603722 ROBO3Q96MS0 1386 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 FARP2O94887 1054 aaPredicted RBP19.59■□□□□ 0.73
TUBE1-206ENST00000603722 XRCC5P13010 732 aaKnown RBP19.59■□□□□ 0.73
TUBE1-206ENST00000603722 EEF2P13639 858 aaKnown RBP19.59■□□□□ 0.73
TUBE1-206ENST00000603722 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
TUBE1-206ENST00000603722 RGS2P41220 211 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 COG2Q14746 738 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 MORN1Q5T089 497 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 UBE2Q1Q7Z7E8 422 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 USP6NLQ92738 828 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 KANSL2Q9H9L4 492 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 MKNK2Q9HBH9 465 aa19.59■□□□□ 0.73
TUBE1-206ENST00000603722 TFRCP02786 760 aaKnown RBP19.58■□□□□ 0.72
TUBE1-206ENST00000603722 APBA2Q99767 749 aa19.58■□□□□ 0.72
TUBE1-206ENST00000603722 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.58■□□□□ 0.72
TUBE1-206ENST00000603722 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.72
TUBE1-206ENST00000603722 KIAA0100Q14667 2235 aaKnown RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 RPTORQ8N122 1335 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 WDR46O15213 610 aaKnown RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 FLOT1O75955 427 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 PRKAR2AP13861 404 aaKnown RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 RASA1P20936 1047 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 CCL14Q16627 93 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 ZMYM1Q5SVZ6 1142 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 SAMD1Q6SPF0 538 aaPredicted RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 IFNL3Q8IZI9 196 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 CRISPLD2Q9H0B8 497 aa19.57■□□□□ 0.72
TUBE1-206ENST00000603722 HMX1Q9NP08 348 aaPredicted RBP19.57■□□□□ 0.72
TUBE1-206ENST00000603722 PDE4DIPQ5VU43 2346 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 RAD21O60216 631 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 PRDM1O75626 825 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 PDE1AP54750 535 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 MAP2K5Q13163 448 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 AAMPQ13685 434 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 TRMT44Q8IYL2 757 aaKnown RBP19.56■□□□□ 0.72
TUBE1-206ENST00000603722 ATG4CQ96DT6 458 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 NACAP1Q9BZK3 213 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 STAP2Q9UGK3 403 aa19.56■□□□□ 0.72
TUBE1-206ENST00000603722 PTPREP23469 700 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 DSG3P32926 999 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 MAP3K21Q5TCX8 1036 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 CCDC129Q6ZRS4 1044 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 EXOC6Q8TAG9 804 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 DPF3Q92784 378 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 MOV10L1Q9BXT6 1211 aaKnown RBP19.55■□□□□ 0.72
TUBE1-206ENST00000603722 LNPKQ9C0E8 428 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 GOPCQ9HD26 462 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 IVNS1ABPQ9Y6Y0 642 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 MYH7P12883 1935 aa19.55■□□□□ 0.72
TUBE1-206ENST00000603722 SLC15A5A6NIM6 579 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 GRB14Q14449 540 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 MB21D1Q8N884 522 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 EVI5LQ96CN4 794 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 HTATIP2Q9BUP3 242 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 NAPBQ9H115 298 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 ZNF287Q9HBT7 754 aa19.54■□□□□ 0.72
TUBE1-206ENST00000603722 BAZ2AQ9UIF9 1905 aaKnown RBP19.54■□□□□ 0.72
TUBE1-206ENST00000603722 H0YGN5 161 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 CAPN2P17655 700 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 ERCC3P19447 782 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 CACNB2Q08289 660 aaPredicted RBP19.53■□□□□ 0.72
TUBE1-206ENST00000603722 PLS1Q14651 629 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 FAM83BQ5T0W9 1011 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 B4GALNT3Q6L9W6 998 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 RWDD1Q9H446 243 aaPredicted RBP19.53■□□□□ 0.72
TUBE1-206ENST00000603722 FBXO28Q9NVF7 368 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 PLXNB2O15031 1838 aa19.53■□□□□ 0.72
TUBE1-206ENST00000603722 SLC34A2O95436 690 aa19.52■□□□□ 0.72
TUBE1-206ENST00000603722 ZNF444Q8N0Y2 327 aaPredicted RBP19.52■□□□□ 0.72
TUBE1-206ENST00000603722 DIS3LQ8TF46 1054 aaKnown RBP19.52■□□□□ 0.72
TUBE1-206ENST00000603722 FLRT1Q9NZU1 646 aa19.52■□□□□ 0.72
TUBE1-206ENST00000603722 IGKV6D-41A0A0C4DH26 115 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 FOXP2O15409 715 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 CCND3P30281 292 aaPredicted RBP19.51■□□□□ 0.71
TUBE1-206ENST00000603722 PPARAQ07869 468 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 TMEM132BQ14DG7 1078 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 NCAPG2Q86XI2 1143 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 SMC5Q8IY18 1101 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 SHCBP1Q8NEM2 672 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 NPLOC4Q8TAT6 608 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 PAWRQ96IZ0 340 aaKnown RBP19.51■□□□□ 0.71
TUBE1-206ENST00000603722 NUP88Q99567 741 aaPredicted RBP19.51■□□□□ 0.71
TUBE1-206ENST00000603722 NYAP2Q9P242 653 aa19.51■□□□□ 0.71
TUBE1-206ENST00000603722 NDUFB10O96000 172 aa19.5■□□□□ 0.71
TUBE1-206ENST00000603722 IGHDP01880 384 aa19.5■□□□□ 0.71
TUBE1-206ENST00000603722 SLC3A2P08195 630 aaKnown RBP19.5■□□□□ 0.71
TUBE1-206ENST00000603722 HOXC6P09630 235 aa19.5■□□□□ 0.71
TUBE1-206ENST00000603722 ADORA2AP29274 412 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms