RNA–Protein interactions for RNA: ENST00000602163.1

SELENOW-215, Transcript of selenoprotein W, human

Gene SELENOW, Length 2,503 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SELENOW-215	ENST00000602163	CATIP	Q7Z7H3	387 aa		11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	KIF3C	O14782	793 aa		11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	TTLL12	Q14166	644 aa	Predicted RBP	11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	SCYL3	Q8IZE3	742 aa		11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	NYAP2	Q9P242	653 aa		11.18	□□□□□ -0.62
SELENOW-215	ENST00000602163	RAD21	O60216	631 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	ADD1	P35611	737 aa	Known RBP	11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	CHADL	Q6NUI6	762 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	CMTR1	Q8N1G2	835 aa	Known RBP	11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	ACER1	Q8TDN7	264 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	NID2	Q14112	1375 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	DDAH1	O94760	285 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	ITGBL1	O95965	494 aa	Predicted RBP	11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	VGLL4	Q14135	290 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	FANCB	Q8NB91	859 aa		11.17	□□□□□ -0.62
SELENOW-215	ENST00000602163	CTDNEP1	O95476	244 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	IREB2	P48200	963 aa	Known RBP	11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	ZYX	Q15942	572 aa	Known RBP	11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	RTN1	Q16799	776 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	MKL1	Q969V6	931 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	CLMN	Q96JQ2	1002 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	SNCAIP	Q9Y6H5	919 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	JAK2	O60674	1132 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	GOLGA8H	P0CJ92	632 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	PDHB	P11177	359 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	PTPRA	P18433	802 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	MAP3K9	P80192	1104 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	DGKZ	Q13574	1117 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	USP17L2	Q6R6M4	530 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	STAG2	Q8N3U4	1231 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	CCDC82	Q8N4S0	544 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	ARHGEF10L	Q9HCE6	1279 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	PICK1	Q9NRD5	415 aa		11.16	□□□□□ -0.62
SELENOW-215	ENST00000602163	PARP14	Q460N5	1801 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	USP17L5	A8MUK1	530 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CELF2	O95319	508 aa	Known RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	PLEKHA8P1	O95397	391 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CALM1	P0DP23	149 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CALM2	P0DP24	149 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CALM3	P0DP25	149 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	YY1	P25490	414 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	RCAN1	P53805	252 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	MAP3K11	Q16584	847 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	PPP4R3B	Q5MIZ7	849 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	NOL9	Q5SY16	702 aa	Known RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	NSUN7	Q8NE18	718 aa	Known RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CTCFL	Q8NI51	663 aa	Predicted RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CNKSR2	Q8WXI2	1034 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	MAD2L2	Q9UI95	211 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163		F5H6K3	240 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	UBE2Q2L	H0YL09	131 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CPLX1	O14810	134 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	KLRC3	Q07444	240 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	NTRK3	Q16288	839 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	KIAA1755	Q5JYT7	1200 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	ANKRD13A	Q8IZ07	590 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	SPICE1	Q8N0Z3	855 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	PHKB	Q93100	1093 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	INTS4	Q96HW7	963 aa	Known RBP	11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CPVL	Q9H3G5	476 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	ELP3	Q9H9T3	547 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	GINM1	Q9NU53	330 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	TMX2	Q9Y320	296 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	CSAD	Q9Y600	493 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	ZHX2	Q9Y6X8	837 aa		11.15	□□□□□ -0.62
SELENOW-215	ENST00000602163	SNHG28	P0DPA3	235 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	GRM4	Q14833	912 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	ARMC9	Q7Z3E5	817 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	NBPF11	Q86T75	865 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	DDX11	Q96FC9	970 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	PTPDC1	A2A3K4	754 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	NDUFB10	O96000	172 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	GJB2	P29033	226 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	SPP2	Q13103	211 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	CST9	Q5W186	159 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	SLFN13	Q68D06	897 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	KCTD1	Q719H9	257 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	NUP88	Q99567	741 aa	Predicted RBP	11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	FEZ1	Q99689	392 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	GBA2	Q9HCG7	927 aa	Predicted RBP	11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	SMC3	Q9UQE7	1217 aa		11.14	□□□□□ -0.63
SELENOW-215	ENST00000602163	PALM3	A6NDB9	673 aa	Predicted RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	TRIM75P	A6NK02	468 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	DHX16	O60231	1041 aa	Known RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	PARP1	P09874	1014 aa	Known RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	MTMR2	Q13614	643 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	TMTC3	Q6ZXV5	915 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	SRBD1	Q8N5C6	995 aa	Known RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	GMCL1P1	Q8NEA9	526 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	SMARCC2	Q8TAQ2	1214 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	MAP3K14	Q99558	947 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	VCPKMT	Q9H867	229 aa		11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	RBM28	Q9NW13	759 aa	Known RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	ISY1	Q9ULR0	285 aa	Known RBP	11.13	□□□□□ -0.63
SELENOW-215	ENST00000602163	LOC285556	D6RIA3	1793 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms