RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 PSMD14O00487 310 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 COPB1P53618 953 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 SMYD4Q8IYR2 804 aaPredicted RBP21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 PLCD3Q8N3E9 789 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 STAG1Q8WVM7 1258 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 RPGRIP1Q96KN7 1286 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 HAUS4Q9H6D7 363 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 RWDD2AQ9UIY3 292 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 TARSL2A2RTX5 802 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 SYF2O95926 243 aaKnown RBP21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 CCDC82Q8N4S0 544 aa21.04■□□□□ 0.96
ARHGEF1-221ENST00000600387 PRPF6O94906 941 aaKnown RBP21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 CASP1P29466 404 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 KRT9P35527 623 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 AKAP17AQ02040 695 aaKnown RBP21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 PPP2R5BQ15173 497 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 RNF26Q9BY78 433 aaPredicted RBP21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 CNNM1Q9NRU3 951 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 TACC3Q9Y6A5 838 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 EPN1Q9Y6I3 576 aaPredicted RBP21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 C1orf167Q5SNV9 1468 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 NDUFA10O95299 355 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 ICE2Q659A1 982 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 VGLL2Q8N8G2 317 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 TTLL11Q8NHH1 800 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 HPCAL4Q9UM19 191 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 CDHR2Q9BYE9 1310 aa21.03■□□□□ 0.96
ARHGEF1-221ENST00000600387 ITGA6P23229 1130 aa21.02■□□□□ 0.96
ARHGEF1-221ENST00000600387 PYM1Q9BRP8 204 aaKnown RBP21.02■□□□□ 0.96
ARHGEF1-221ENST00000600387 VPS16Q9H269 839 aa21.02■□□□□ 0.96
ARHGEF1-221ENST00000600387 ZNF142P52746 1687 aaPredicted RBP21.02■□□□□ 0.96
ARHGEF1-221ENST00000600387 ANKRD18BA2A2Z9 1011 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 MBD4O95243 580 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 KRT2P35908 639 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 TCP11X2Q5H9J9 407 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZNF654Q8IZM8 581 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 GUCA1BQ9UMX6 200 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 PCDH11XQ9BZA7 1347 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 PCDH11YQ9BZA8 1340 aa21.02■□□□□ 0.95
ARHGEF1-221ENST00000600387 ARAP2Q8WZ64 1704 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 RNF225M0QZC1 329 aaPredicted RBP21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 PDE8BO95263 885 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 PHKA1P46020 1223 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 CKAP4Q07065 602 aaKnown RBP21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 PAK1Q13153 545 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 RRAGBQ5VZM2 374 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 EFCAB13Q8IY85 973 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 CMTR1Q8N1G2 835 aaKnown RBP21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 COG1Q8WTW3 980 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZBTB9Q96C00 473 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZKSCAN3Q9BRR0 538 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 NACAP1Q9BZK3 213 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 TOMM22Q9NS69 142 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 IQSEC3Q9UPP2 1182 aaPredicted RBP21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 SAR1BQ9Y6B6 198 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 KCNJ18B7U540 433 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 GNAT2P19087 354 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 MAP3K12Q12852 859 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 KCNJ12Q14500 433 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 DNAJC21Q5F1R6 531 aaKnown RBP21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 PACS2Q86VP3 889 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 NUP133Q8WUM0 1156 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 FAM107BQ9H098 131 aa21.01■□□□□ 0.95
ARHGEF1-221ENST00000600387 BCORQ6W2J9 1755 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 GSG1L2A8MUP6 293 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 CDC25AP30304 524 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 PAPD7Q5XG87 772 aaKnown RBP21■□□□□ 0.95
ARHGEF1-221ENST00000600387 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZNF662Q6ZS27 426 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 EHBP1Q8NDI1 1231 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 PHF20Q9BVI0 1012 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 BRMS1Q9HCU9 246 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 TAB2Q9NYJ8 693 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 REXO2Q9Y3B8 237 aaKnown RBP21■□□□□ 0.95
ARHGEF1-221ENST00000600387 TNS3Q68CZ2 1445 aa21■□□□□ 0.95
ARHGEF1-221ENST00000600387 STIM1Q13586 685 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 MAGEB6Q8N7X4 407 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 OR8K1Q8NGG5 319 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 RNF41Q9H4P4 317 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 GREM2Q9H772 168 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 RTL9Q8NET4 1388 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 CHP1Q99653 195 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 DNAJC5Q9H3Z4 198 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 YY1AP1Q9H869 796 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 ARMT1Q9H993 441 aa20.99■□□□□ 0.95
ARHGEF1-221ENST00000600387 XDHP47989 1333 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 FAM205CA6NFA0 338 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 CPP00450 1065 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 TDO2P48775 406 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 GTF2A1P52655 376 aaPredicted RBP20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 UBXN1Q04323 297 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 RMND1Q9NWS8 449 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 TNS2Q63HR2 1409 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZC3H4Q9UPT8 1303 aaKnown RBP20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 GTPBP6O43824 516 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms