RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 VCPKMTQ9H867 229 aa14.4□□□□□ -0.1
TGFB1-204ENST00000600196 KAT14Q9H8E8 782 aa14.4□□□□□ -0.1
TGFB1-204ENST00000600196 ELP3Q9H9T3 547 aa14.4□□□□□ -0.1
TGFB1-204ENST00000600196 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
TGFB1-204ENST00000600196 STX8Q9UNK0 236 aa14.4□□□□□ -0.1
TGFB1-204ENST00000600196 A0A0G2JLL6 359 aaPredicted RBP14.39□□□□□ -0.11
TGFB1-204ENST00000600196 IRF6O14896 467 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 FDX1P10109 184 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 MAP2K2P36507 400 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 GNAQP50148 359 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 FGD1P98174 961 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 SPP2Q13103 211 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 NOGQ13253 232 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.118e-10■□□□□ 9.7
TGFB1-204ENST00000600196 GPATCH4Q5T3I0 446 aaKnown RBP14.39□□□□□ -0.11
TGFB1-204ENST00000600196 MOB2Q70IA6 237 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 PRRT2Q7Z6L0 340 aaPredicted RBP14.39□□□□□ -0.11
TGFB1-204ENST00000600196 CATIPQ7Z7H3 387 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 DCAF4Q8WV16 495 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 ZSCAN31Q96LW9 406 aaPredicted RBP14.39□□□□□ -0.11
TGFB1-204ENST00000600196 LY9Q9HBG7 655 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 TMOD4Q9NZQ9 345 aa14.39□□□□□ -0.11
TGFB1-204ENST00000600196 CCDC196A0A1B0GTZ2 297 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 F5H6K3 240 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 WDR46O15213 610 aaKnown RBP14.38□□□□□ -0.11
TGFB1-204ENST00000600196 HSPA6P17066 643 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
TGFB1-204ENST00000600196 KLRC3Q07444 240 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 Q6ZUG5 572 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 LZTS2Q9BRK4 669 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 MYPNQ86TC9 1320 aa14.38□□□□□ -0.11
TGFB1-204ENST00000600196 A0A1W2PRG0 241 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
TGFB1-204ENST00000600196 KIF5BP33176 963 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 TM4SF4P48230 202 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 TROAPQ12815 778 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 OTUD7BQ6GQQ9 843 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 RASAL3Q86YV0 1011 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 GTF3C2Q8WUA4 911 aaPredicted RBP14.37□□□□□ -0.11
TGFB1-204ENST00000600196 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 MS4A4AQ96JQ5 239 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 FEZ1Q99689 392 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 SH2B1Q9NRF2 756 aaPredicted RBP14.37□□□□□ -0.11
TGFB1-204ENST00000600196 FZD1Q9UP38 647 aa14.37□□□□□ -0.11
TGFB1-204ENST00000600196 NID2Q14112 1375 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 FAM155AB1AL88 458 aaPredicted RBP14.36□□□□□ -0.11
TGFB1-204ENST00000600196 NMT2O60551 498 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 ALDH1A1P00352 501 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 NFXL1Q6ZNB6 911 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 ANKRD23Q86SG2 305 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 ACER1Q8TDN7 264 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 SNX21Q969T3 373 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 ZKSCAN3Q9BRR0 538 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
TGFB1-204ENST00000600196 EMILIN3Q9NT22 766 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 RBM28Q9NW13 759 aaKnown RBP14.36□□□□□ -0.11
TGFB1-204ENST00000600196 LIMCH1Q9UPQ0 1083 aa14.36□□□□□ -0.11
TGFB1-204ENST00000600196 TRIM75PA6NK02 468 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L15C9J2P7 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L13C9JLJ4 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L11C9JVI0 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L18D6R9N7 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L22D6RA61 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L17D6RBQ6 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L19D6RCP7 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L20D6RJB6 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 USP17L24Q0WX57 530 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 MTMR2Q13614 643 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 TOB2Q14106 344 aaPredicted RBP14.35□□□□□ -0.11
TGFB1-204ENST00000600196 SLFN13Q68D06 897 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 APOA5Q6Q788 366 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 BTNL9Q6UXG8 535 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 ZNF654Q8IZM8 581 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 NKX2-3Q8TAU0 364 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 BRF1Q92994 677 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 HOXC10Q9NYD6 342 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 FEM1BQ9UK73 627 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 PNMA3Q9UL41 463 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 ATAD5Q96QE3 1844 aa14.35□□□□□ -0.11
TGFB1-204ENST00000600196 PALM3A6NDB9 673 aaPredicted RBP14.34□□□□□ -0.11
TGFB1-204ENST00000600196 ZBTB43O43298 467 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 NDUFB10O96000 172 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 PARP1P09874 1014 aaKnown RBP14.34□□□□□ -0.11
TGFB1-204ENST00000600196 PDHBP11177 359 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 BMP3P12645 472 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 SLC1A4P43007 532 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 ATP2B2Q01814 1243 aa14.34□□□□□ -0.11
TGFB1-204ENST00000600196 TRAF1Q13077 416 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms