RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
HOMER3-212ENST00000600077 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
HOMER3-212ENST00000600077 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
HOMER3-212ENST00000600077 USP44Q9H0E7 712 aa16.9■□□□□ 0.3
HOMER3-212ENST00000600077 SIL1Q9H173 461 aa16.9■□□□□ 0.3
HOMER3-212ENST00000600077 MUC6Q6W4X9 2439 aa16.9■□□□□ 0.3
HOMER3-212ENST00000600077 ZNF236Q9UL36 1845 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 PLCG2P16885 1265 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 KCNQ1P51787 676 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 SKIV2LQ15477 1246 aaKnown RBP16.89■□□□□ 0.29
HOMER3-212ENST00000600077 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 TSEN34Q9BSV6 310 aaKnown RBP16.89■□□□□ 0.29
HOMER3-212ENST00000600077 DNAJC18Q9H819 358 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
HOMER3-212ENST00000600077 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
HOMER3-212ENST00000600077 BAG3O95817 575 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 ADORA1P30542 326 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 SLFN5Q08AF3 891 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 C16orf59Q7L2K0 433 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 ABRAQ8N0Z2 381 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 STARD7Q9NQZ5 370 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 TBX21Q9UL17 535 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 COG5Q9UP83 839 aa16.88■□□□□ 0.29
HOMER3-212ENST00000600077 COBLO75128 1261 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 HLA-DOAP06340 250 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 VCAM1P19320 739 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 MRE11P49959 708 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
HOMER3-212ENST00000600077 ZYXQ15942 572 aaKnown RBP16.87■□□□□ 0.29
HOMER3-212ENST00000600077 ZNF365Q70YC5 407 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 MOV10L1Q9BXT6 1211 aaKnown RBP16.87■□□□□ 0.29
HOMER3-212ENST00000600077 KIAA1683Q9H0B3 1180 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 NKX2-4Q9H2Z4 354 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 HOXC10Q9NYD6 342 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
HOMER3-212ENST00000600077 PGK1P00558 417 aa16.86■□□□□ 0.29
HOMER3-212ENST00000600077 GH2P01242 217 aa16.86■□□□□ 0.29
HOMER3-212ENST00000600077 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
HOMER3-212ENST00000600077 SH3RF3Q8TEJ3 882 aaPredicted RBP16.86■□□□□ 0.29
HOMER3-212ENST00000600077 MAML3Q96JK9 1138 aa16.86■□□□□ 0.29
HOMER3-212ENST00000600077 MROH8Q9H579 483 aa16.86■□□□□ 0.29
HOMER3-212ENST00000600077 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 MOXD2PA6NHM9 499 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 SMIM22K7EJ46 135 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 CSF2RAP15509 400 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 ERCC3P19447 782 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 TIMM10P62072 90 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 C11orf16Q9NQ32 467 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 AKAP2Q9Y2D5 859 aa16.85■□□□□ 0.29
HOMER3-212ENST00000600077 APBB1O00213 710 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
HOMER3-212ENST00000600077 TLL1O43897 1013 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 POU3F3P20264 500 aaPredicted RBP16.84■□□□□ 0.29
HOMER3-212ENST00000600077 ACLYP53396 1101 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 COG2Q14746 738 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 TGFBRAP1Q8WUH2 860 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 RPAP3Q9H6T3 665 aaPredicted RBP16.84■□□□□ 0.29
HOMER3-212ENST00000600077 PTPRCP08575 1304 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 FLT1P17948 1338 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
HOMER3-212ENST00000600077 PRR33A8MZF0 331 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 PI4K2BG5E9Z4 385 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 AKR1A1P14550 325 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 PPP2R2DQ66LE6 453 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 MRPL50Q8N5N7 158 aaKnown RBP16.83■□□□□ 0.28
HOMER3-212ENST00000600077 MB21D1Q8N884 522 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 SPATA5Q8NB90 893 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 XAGE2Q96GT9 111 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 HMG20BQ9P0W2 317 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 LRP2BPQ9P2M1 347 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
HOMER3-212ENST00000600077 ELP1O95163 1332 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 A0A1B0GUL7 405 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 FAM86C2PA6NEL3 165 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 FGBP02675 491 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 ACRP10323 421 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 FCER1AP12319 257 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 PPP4CP60510 307 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 TBC1D9Q6ZT07 1266 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 GLT1D1Q96MS3 346 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 IL23AQ9NPF7 189 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 AATFQ9NY61 560 aaKnown RBP eCLIP16.82■□□□□ 0.28
HOMER3-212ENST00000600077 HDAC5Q9UQL6 1122 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 YBX2Q9Y2T7 364 aaKnown RBP16.82■□□□□ 0.28
HOMER3-212ENST00000600077 SMCHD1A6NHR9 2005 aa16.82■□□□□ 0.28
HOMER3-212ENST00000600077 TLR3O15455 904 aaKnown RBP16.81■□□□□ 0.28
HOMER3-212ENST00000600077 ADAMTS4O75173 837 aa16.81■□□□□ 0.28
HOMER3-212ENST00000600077 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
HOMER3-212ENST00000600077 ALDH1L2Q3SY69 923 aa16.81■□□□□ 0.28
HOMER3-212ENST00000600077 TATDN1Q6P1N9 297 aa16.81■□□□□ 0.28
HOMER3-212ENST00000600077 NCAPG2Q86XI2 1143 aa16.81■□□□□ 0.28
HOMER3-212ENST00000600077 KCNH6Q9H252 994 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms