RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L15C9J2P7 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L13C9JLJ4 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L11C9JVI0 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L18D6R9N7 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L22D6RA61 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L17D6RBQ6 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L19D6RCP7 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L20D6RJB6 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 CHMLP26374 656 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 USP17L24Q0WX57 530 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 ALX1Q15699 326 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 PKN2Q16513 984 aaKnown RBP14.31□□□□□ -0.12
ZNF548-209ENST00000598895 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.31□□□□□ -0.12
ZNF548-209ENST00000598895 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
ZNF548-209ENST00000598895 TSPY2A6NKD2 308 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
ZNF548-209ENST00000598895 GCLCP48506 637 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-209ENST00000598895 FCGRTP55899 365 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 ARHGEF6Q15052 776 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 CEP95Q96GE4 821 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 VCPKMTQ9H867 229 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 TXNRD2Q9NNW7 524 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 PTCH2Q9Y6C5 1203 aa14.3□□□□□ -0.12
ZNF548-209ENST00000598895 IGKV6D-41A0A0C4DH26 115 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 TNPO2O14787 897 aaKnown RBP14.29□□□□□ -0.12
ZNF548-209ENST00000598895 NMT2O60551 498 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 FAM110CQ1W6H9 321 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 POTEEQ6S8J3 1075 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
ZNF548-209ENST00000598895 NEDD1Q8NHV4 660 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
ZNF548-209ENST00000598895 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 RBPJLQ9UBG7 517 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 ZMYM6O95789 1325 aa14.29□□□□□ -0.12
ZNF548-209ENST00000598895 ZNF213O14771 459 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 MYCP01106 439 aaPredicted RBP14.28□□□□□ -0.12
ZNF548-209ENST00000598895 PRKCZQ05513 592 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 BECN1Q14457 450 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 Q3C1V9 767 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 PARP14Q460N5 1801 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 MYPNQ86TC9 1320 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 RUFY2Q8WXA3 655 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 MTMR4Q9NYA4 1195 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 GABRQQ9UN88 632 aa14.28□□□□□ -0.12
ZNF548-209ENST00000598895 NEDD4P46934 1319 aa14.27□□□□□ -0.12
ZNF548-209ENST00000598895 RAD50Q92878 1312 aa14.27□□□□□ -0.12
ZNF548-209ENST00000598895 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
ZNF548-209ENST00000598895 FLOT1O75955 427 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 SOX10P56693 466 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 PTH1RQ03431 593 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 GPRC5AQ8NFJ5 357 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 LPAR1Q92633 364 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 BTBD7Q9P203 1132 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 MORF4L1Q9UBU8 362 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 SRRDQ9UH36 339 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 ISY1Q9ULR0 285 aaKnown RBP14.27□□□□□ -0.13
ZNF548-209ENST00000598895 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 MTMR7Q9Y216 660 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 RLFQ13129 1914 aa14.27□□□□□ -0.13
ZNF548-209ENST00000598895 PLIN4Q96Q06 1357 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 F5H6K3 240 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 WDR46O15213 610 aaKnown RBP14.26□□□□□ -0.13
ZNF548-209ENST00000598895 ORC4O43929 436 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 CNMDO75829 334 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 TTLL1O95922 423 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 HOXD10P28358 340 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 ERVK-9P63128 1117 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 ERVK-24P63145 666 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 KLRC3Q07444 240 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 COG2Q14746 738 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 WDR78Q5VTH9 848 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 RAET1EQ8TD07 263 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 PORCNQ9H237 461 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 UPF2Q9HAU5 1272 aaKnown RBP14.26□□□□□ -0.13
ZNF548-209ENST00000598895 IL17RBQ9NRM6 502 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 COL11A1P12107 1806 aaPredicted RBP14.26□□□□□ -0.13
ZNF548-209ENST00000598895 A0A0G2JMZ2 1700 aa14.26□□□□□ -0.13
ZNF548-209ENST00000598895 SGSM2O43147 1006 aa14.25□□□□□ -0.13
ZNF548-209ENST00000598895 NDUFB10O96000 172 aa14.25□□□□□ -0.13
ZNF548-209ENST00000598895 GNRH1P01148 92 aa14.25□□□□□ -0.13
ZNF548-209ENST00000598895 FLT3LGP49771 235 aa14.25□□□□□ -0.13
ZNF548-209ENST00000598895 PLS1Q14651 629 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms