RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 LAMA4Q16363 1823 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 SGSM2O43147 1006 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 GNRH1P01148 92 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 PCP11498 1178 aaKnown RBP24.66■■□□□ 1.54
PAF1-207ENST00000598127 HERVK_113P62684 666 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 FAM110CQ1W6H9 321 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 KIAA1755Q5JYT7 1200 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 MKL1Q969V6 931 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 CEP95Q96GE4 821 aa24.66■■□□□ 1.54
PAF1-207ENST00000598127 RPAP3Q9H6T3 665 aaPredicted RBP24.66■■□□□ 1.54
PAF1-207ENST00000598127 TSPY2A6NKD2 308 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 RANBP6O60518 1105 aaKnown RBP24.65■■□□□ 1.54
PAF1-207ENST00000598127 AKNAD1Q5T1N1 836 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 FBXO46Q6PJ61 603 aaPredicted RBP24.65■■□□□ 1.54
PAF1-207ENST00000598127 ARHGAP39Q9C0H5 1083 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 GOPCQ9HD26 462 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 CLIP2Q9UDT6 1046 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 ZSWIM8A7E2V4 1837 aa24.65■■□□□ 1.54
PAF1-207ENST00000598127 DOCK3Q8IZD9 2030 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 PSMC4P43686 418 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 PPP4R3BQ5MIZ7 849 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 MFSD6Q6ZSS7 791 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 GTF3C2Q8WUA4 911 aaPredicted RBP24.64■■□□□ 1.54
PAF1-207ENST00000598127 STAG1Q8WVM7 1258 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 ABHD8Q96I13 439 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 NBPF3Q9H094 633 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 RNF41Q9H4P4 317 aaPredicted RBP24.64■■□□□ 1.54
PAF1-207ENST00000598127 MORF4L1Q9UBU8 362 aa24.64■■□□□ 1.54
PAF1-207ENST00000598127 WDR46O15213 610 aaKnown RBP24.63■■□□□ 1.53
PAF1-207ENST00000598127 TTLL1O95922 423 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 CTGFP29279 349 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 IMMTQ16891 758 aaKnown RBP24.63■■□□□ 1.53
PAF1-207ENST00000598127 SPICE1Q8N0Z3 855 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 TOMM22Q9NS69 142 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 SYNPO2Q9UMS6 1093 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 PTPN22Q9Y2R2 807 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 RLFQ13129 1914 aa24.63■■□□□ 1.53
PAF1-207ENST00000598127 FMNL1O95466 1100 aaPredicted RBP24.62■■□□□ 1.53
PAF1-207ENST00000598127 HOXD10P28358 340 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 COG2Q14746 738 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 RRP12Q5JTH9 1297 aaKnown RBP24.62■■□□□ 1.53
PAF1-207ENST00000598127 LBX2Q6XYB7 198 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 TBC1D10CQ8IV04 446 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 TRIM47Q96LD4 638 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 HOXC10Q9NYD6 342 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 RBPJLQ9UBG7 517 aa24.62■■□□□ 1.53
PAF1-207ENST00000598127 FCGRTP55899 365 aa24.61■■□□□ 1.53
PAF1-207ENST00000598127 PTH1RQ03431 593 aa24.61■■□□□ 1.53
PAF1-207ENST00000598127 TANGO6Q9C0B7 1094 aa24.61■■□□□ 1.53
PAF1-207ENST00000598127 IL17RBQ9NRM6 502 aa24.61■■□□□ 1.53
PAF1-207ENST00000598127 F5H6K3 240 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 ECM2O94769 699 aaPredicted RBP24.6■■□□□ 1.53
PAF1-207ENST00000598127 NT5C2P49902 561 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 PRMT2P55345 433 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 KLRC3Q07444 240 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 POTEEQ6S8J3 1075 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 GPRC5AQ8NFJ5 357 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 TXNRD2Q9NNW7 524 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 TCP11L1Q9NUJ3 509 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 RABGAP1Q9Y3P9 1069 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 PARP14Q460N5 1801 aa24.6■■□□□ 1.53
PAF1-207ENST00000598127 RAD21O60216 631 aa24.59■■□□□ 1.53
PAF1-207ENST00000598127 NOVP48745 357 aa24.59■■□□□ 1.53
PAF1-207ENST00000598127 ESYT1Q9BSJ8 1104 aa24.59■■□□□ 1.53
PAF1-207ENST00000598127 U3KPZ7 1027 aaPredicted RBP24.59■■□□□ 1.53
PAF1-207ENST00000598127 SPDYE16A6NNV3 312 aaPredicted RBP24.58■■□□□ 1.53
PAF1-207ENST00000598127 ERVK-9P63128 1117 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 ERVK-24P63145 666 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 Q3C1V9 767 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 KIAA1211Q6ZU35 1233 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 ESR2Q92731 530 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 MAP4K1Q92918 833 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 SRRDQ9UH36 339 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 HPS5Q9UPZ3 1129 aa24.58■■□□□ 1.53
PAF1-207ENST00000598127 MYPNQ86TC9 1320 aa24.58■■□□□ 1.52
PAF1-207ENST00000598127 NMT2O60551 498 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 FLOT1O75955 427 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 NDUFB10O96000 172 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 DSG3P32926 999 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 IFFO2Q5TF58 517 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 GMCL1P1Q8NEA9 526 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 PAGR1Q9BTK6 254 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 STX8Q9UNK0 236 aa24.57■■□□□ 1.52
PAF1-207ENST00000598127 TNPO2O14787 897 aaKnown RBP24.56■■□□□ 1.52
PAF1-207ENST00000598127 PEX10O60683 326 aa24.56■■□□□ 1.52
PAF1-207ENST00000598127 CNMDO75829 334 aa24.56■■□□□ 1.52
PAF1-207ENST00000598127 FAM83BQ5T0W9 1011 aa24.56■■□□□ 1.52
PAF1-207ENST00000598127 LRRC47Q8N1G4 583 aaKnown RBP24.56■■□□□ 1.52
PAF1-207ENST00000598127 NEDD4P46934 1319 aa24.56■■□□□ 1.52
PAF1-207ENST00000598127 COA7Q96BR5 231 aa24.55■■□□□ 1.52
PAF1-207ENST00000598127 TTC14Q96N46 770 aa24.55■■□□□ 1.52
PAF1-207ENST00000598127 CNNM2Q9H8M5 875 aa24.55■■□□□ 1.52
PAF1-207ENST00000598127 PTCH2Q9Y6C5 1203 aa24.55■■□□□ 1.52
PAF1-207ENST00000598127 CDC45O75419 566 aa24.54■■□□□ 1.52
PAF1-207ENST00000598127 SLFN13Q68D06 897 aa24.54■■□□□ 1.52
PAF1-207ENST00000598127 CASC1Q6TDU7 716 aa24.54■■□□□ 1.52
PAF1-207ENST00000598127 MB21D1Q8N884 522 aa24.54■■□□□ 1.52
PAF1-207ENST00000598127 NKX2-3Q8TAU0 364 aa24.54■■□□□ 1.52
PAF1-207ENST00000598127 NUP88Q99567 741 aaPredicted RBP24.54■■□□□ 1.52
PAF1-207ENST00000598127 KRT23Q9C075 422 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms