RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 RASGRP2Q7LDG7 609 aa24.41■■□□□ 1.5
IRF3-214ENST00000596788 CATIPQ7Z7H3 387 aa24.41■■□□□ 1.5
IRF3-214ENST00000596788 MKL1Q969V6 931 aa24.41■■□□□ 1.5
IRF3-214ENST00000596788 ZSCAN31Q96LW9 406 aaPredicted RBP24.41■■□□□ 1.5
IRF3-214ENST00000596788 ARHGEF10LQ9HCE6 1279 aa24.41■■□□□ 1.5
IRF3-214ENST00000596788 TROAPQ12815 778 aa24.4■■□□□ 1.5
IRF3-214ENST00000596788 NECAB1Q8N987 351 aa24.4■■□□□ 1.5
IRF3-214ENST00000596788 ELP3Q9H9T3 547 aa24.4■■□□□ 1.5
IRF3-214ENST00000596788 SH2B1Q9NRF2 756 aaPredicted RBP24.4■■□□□ 1.5
IRF3-214ENST00000596788 GOLGA8AA7E2F4 631 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 PFKFB2O60825 505 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 RCAN1P53805 252 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 BECN1Q14457 450 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 SYNE3Q6ZMZ3 975 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 C2orf69Q8N8R5 385 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 NUP133Q8WUM0 1156 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 GTF3C6Q969F1 213 aa24.39■■□□□ 1.49
IRF3-214ENST00000596788 CCDC144CPQ8IYA2 1237 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 CNKSR2Q8WXI2 1034 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 WDR18Q9BV38 432 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 SLKQ9H2G2 1235 aaPredicted RBP24.38■■□□□ 1.49
IRF3-214ENST00000596788 NCOA5Q9HCD5 579 aaKnown RBP24.38■■□□□ 1.49
IRF3-214ENST00000596788 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.38■■□□□ 1.49
IRF3-214ENST00000596788 SYNPO2Q9UMS6 1093 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 MTMR7Q9Y216 660 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 TMX2Q9Y320 296 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 LOC285556D6RIA3 1793 aa24.38■■□□□ 1.49
IRF3-214ENST00000596788 SPDYE5A6NIY4 337 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 METAP2P50579 478 aaKnown RBP eCLIP24.37■■□□□ 1.49
IRF3-214ENST00000596788 CCT2P78371 535 aaKnown RBP24.37■■□□□ 1.49
IRF3-214ENST00000596788 SCRN1Q12765 414 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 GMCL1P1Q8NEA9 526 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 SH2D4AQ9H788 454 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 AS3MTQ9HBK9 375 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 ZHX2Q9Y6X8 837 aa24.37■■□□□ 1.49
IRF3-214ENST00000596788 CALM1P0DP23 149 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 CALM2P0DP24 149 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 CALM3P0DP25 149 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 PDHBP11177 359 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 GRM4Q14833 912 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 RTN1Q16799 776 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 CCDC83Q8IWF9 413 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 ZNF280CQ8ND82 737 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 CHMP4CQ96CF2 233 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 FEZ1Q99689 392 aa24.36■■□□□ 1.49
IRF3-214ENST00000596788 FAM217BQ9NTX9 383 aaPredicted RBP24.36■■□□□ 1.49
IRF3-214ENST00000596788 UNCXA6NJT0 531 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 NDUFB10O96000 172 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 SNHG28P0DPA3 235 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 CDC27P30260 824 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 FSTL1Q12841 308 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 SPP2Q13103 211 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 MTMR2Q13614 643 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 CUL4AQ13619 759 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 ZYXQ15942 572 aaKnown RBP24.35■■□□□ 1.49
IRF3-214ENST00000596788 KIAA1755Q5JYT7 1200 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 ERO1BQ86YB8 467 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 KIAA1683Q9H0B3 1180 aa24.35■■□□□ 1.49
IRF3-214ENST00000596788 F5H6K3 240 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 KLRC3Q07444 240 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 SLFN13Q68D06 897 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 FANCBQ8NB91 859 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 OTUD5Q96G74 571 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 MAP3K14Q99558 947 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 VCPKMTQ9H867 229 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 GOPCQ9HD26 462 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 AFG3L2Q9Y4W6 797 aa24.34■■□□□ 1.49
IRF3-214ENST00000596788 TRIM75PA6NK02 468 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 RAD21O60216 631 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 SLC4A3P48751 1232 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 PPATQ06203 517 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 DGKZQ13574 1117 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 CTCFLQ8NI51 663 aaPredicted RBP24.33■■□□□ 1.49
IRF3-214ENST00000596788 DCAF4Q8WV16 495 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 OPTNQ96CV9 577 aa24.33■■□□□ 1.49
IRF3-214ENST00000596788 PARP14Q460N5 1801 aa24.33■■□□□ 1.48
IRF3-214ENST00000596788 MYH6P13533 1939 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 USP17L10C9JJH3 530 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 GJA5P36382 358 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 BACE1P56817 501 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 PPIL2Q13356 520 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 USP17L2Q6R6M4 530 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 SPICE1Q8N0Z3 855 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 STAG2Q8N3U4 1231 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 GMCL1Q96IK5 515 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 NUP88Q99567 741 aaPredicted RBP24.32■■□□□ 1.48
IRF3-214ENST00000596788 MAD2L2Q9UI95 211 aa24.32■■□□□ 1.48
IRF3-214ENST00000596788 FRMPD2Q68DX3 1309 aaPredicted RBP24.32■■□□□ 1.48
IRF3-214ENST00000596788 PALM3A6NDB9 673 aaPredicted RBP24.31■■□□□ 1.48
IRF3-214ENST00000596788 DTNBO60941 627 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 PLEKHA8P1O95397 391 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 PARP1P09874 1014 aaKnown RBP24.31■■□□□ 1.48
IRF3-214ENST00000596788 GOLGA8HP0CJ92 632 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 ADD1P35611 737 aaKnown RBP24.31■■□□□ 1.48
IRF3-214ENST00000596788 HUNKP57058 714 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 ZNF543Q08ER8 600 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 CCDC96Q2M329 555 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 SLC10A4Q96EP9 437 aa24.31■■□□□ 1.48
IRF3-214ENST00000596788 RBM28Q9NW13 759 aaKnown RBP24.31■■□□□ 1.48
IRF3-214ENST00000596788 CTDNEP1O95476 244 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms