RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 NOGQ13253 232 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 SH3D19Q5HYK7 790 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 BLOC1S2Q6QNY1 142 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 DHX32Q7L7V1 743 aaKnown RBP18.24■□□□□ 0.51
SMCO4-206ENST00000596676 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
SMCO4-206ENST00000596676 TESPA1A2RU30 521 aaPredicted RBP18.23■□□□□ 0.51
SMCO4-206ENST00000596676 MANSC4A6NHS7 340 aaPredicted RBP18.23■□□□□ 0.51
SMCO4-206ENST00000596676 F5H6K3 240 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
SMCO4-206ENST00000596676 NDUFB10O96000 172 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 CETPP11597 493 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 KLRC3Q07444 240 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 RAB11FIP4Q86YS3 637 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
SMCO4-206ENST00000596676 TBC1D2Q9BYX2 928 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 CEP350Q5VT06 3117 aa18.23■□□□□ 0.51
SMCO4-206ENST00000596676 C19orf81C9J6K1 198 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
SMCO4-206ENST00000596676 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
SMCO4-206ENST00000596676 RBM25P49756 843 aaKnown RBP18.22■□□□□ 0.51
SMCO4-206ENST00000596676 WTAPQ15007 396 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 ANKS1AQ92625 1134 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
SMCO4-206ENST00000596676 VCAM1P19320 739 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 TM4SF4P48230 202 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 ANAPC15P60006 121 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 FAM83BQ5T0W9 1011 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
SMCO4-206ENST00000596676 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 Q6ZUG5 572 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 IL17RAQ96F46 866 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 TTC14Q96N46 770 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 TM6SF1Q9BZW5 370 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 LOC285556D6RIA3 1793 aa18.21■□□□□ 0.51
SMCO4-206ENST00000596676 PSMA5P28066 241 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 MAP2K2P36507 400 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 IFNL1Q8IU54 200 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 PNMA1Q8ND90 353 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 TMEM87BQ96K49 555 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-206ENST00000596676 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 BRPF3Q9ULD4 1205 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
SMCO4-206ENST00000596676 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-206ENST00000596676 ERICH2A1L162 156 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 PDHXO00330 501 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 PEX10O60683 326 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 NT5C2P49902 561 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 USP14P54578 494 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 APOBRQ0VD83 1088 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 TOB2Q14106 344 aaPredicted RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 CCDC178Q5BJE1 867 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 PROCA1Q8NCQ7 364 aaPredicted RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 R3HDMLQ9H3Y0 253 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 SH2D4AQ9H788 454 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
SMCO4-206ENST00000596676 GOPCQ9HD26 462 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 AGTPBP1Q9UPW5 1226 aa18.19■□□□□ 0.5
SMCO4-206ENST00000596676 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 CYP2C8P10632 490 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 RXRAP19793 462 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 SREBF2Q12772 1141 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
SMCO4-206ENST00000596676 TTBK2Q6IQ55 1244 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 ANKRD23Q86SG2 305 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 BRF1Q92994 677 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 GPCPD1Q9NPB8 672 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 PDRG1Q9NUG6 133 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 ISY1Q9ULR0 285 aaKnown RBP18.18■□□□□ 0.5
SMCO4-206ENST00000596676 THSD7BQ9C0I4 1608 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 WDR19Q8NEZ3 1342 aa18.18■□□□□ 0.5
SMCO4-206ENST00000596676 PDHBP11177 359 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 NEK4P51957 841 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 PPP4R3BQ5MIZ7 849 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 POTEEQ6S8J3 1075 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 CCDC144CPQ8IYA2 1237 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 P2RX7Q99572 595 aaKnown RBP18.17■□□□□ 0.5
SMCO4-206ENST00000596676 TANGO6Q9C0B7 1094 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
SMCO4-206ENST00000596676 TBC1D8O95759 1140 aa18.16■□□□□ 0.5
SMCO4-206ENST00000596676 BMP3P12645 472 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms