RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 PRC1O43663 620 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 HMGB1P09429 215 aaKnown RBP17.58■□□□□ 0.41
DDX49-204ENST00000595858 PSMA5P28066 241 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 ANAPC15P60006 121 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 SEC23AQ15436 765 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 GADL1Q6ZQY3 521 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 DHX32Q7L7V1 743 aaKnown RBP17.58■□□□□ 0.41
DDX49-204ENST00000595858 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.41
DDX49-204ENST00000595858 PROCA1Q8NCQ7 364 aaPredicted RBP17.58■□□□□ 0.41
DDX49-204ENST00000595858 C12orf42Q96LP6 360 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 TMEM47Q9BQJ4 181 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 VCPKMTQ9H867 229 aa17.58■□□□□ 0.41
DDX49-204ENST00000595858 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
DDX49-204ENST00000595858 TOP1P11387 765 aaKnown RBP17.58■□□□□ 0.4
DDX49-204ENST00000595858 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
DDX49-204ENST00000595858 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
DDX49-204ENST00000595858 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.4
DDX49-204ENST00000595858 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
DDX49-204ENST00000595858 IGDCC4Q8TDY8 1250 aa17.58■□□□□ 0.4
DDX49-204ENST00000595858 MTA3Q9BTC8 594 aa17.58■□□□□ 0.4
DDX49-204ENST00000595858 PTPRFP10586 1907 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 ERICH2A1L162 156 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 F5H6K3 240 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 IGF2BP3O00425 579 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX49-204ENST00000595858 CPA1P15085 419 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 KLRC3Q07444 240 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 BLOC1S2Q6QNY1 142 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 IFNL1Q8IU54 200 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 IL17RAQ96F46 866 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 C22orf23Q9BZE7 217 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 TM6SF1Q9BZW5 370 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
DDX49-204ENST00000595858 GOPCQ9HD26 462 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 CEP350Q5VT06 3117 aa17.57■□□□□ 0.4
DDX49-204ENST00000595858 CASTP20810 708 aaKnown RBP17.56■□□□□ 0.4
DDX49-204ENST00000595858 TMEM67Q5HYA8 995 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 TREML2Q5T2D2 321 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 SPICE1Q8N0Z3 855 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 LPAR1Q92633 364 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 ZSWIM6Q9HCJ5 1215 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 WDR19Q8NEZ3 1342 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 RAD21O60216 631 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 IFIT1BQ5T764 474 aaKnown RBP17.56■□□□□ 0.4
DDX49-204ENST00000595858 ANKRD23Q86SG2 305 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 TCEANC2Q96MN5 208 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 LRRC2Q9BYS8 371 aa17.56■□□□□ 0.4
DDX49-204ENST00000595858 GPHNQ9NQX3 736 aaPredicted RBP17.56■□□□□ 0.4
DDX49-204ENST00000595858 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 NDUFB10O96000 172 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 VCAM1P19320 739 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 RBM25P49756 843 aaKnown RBP17.55■□□□□ 0.4
DDX49-204ENST00000595858 WTAPQ15007 396 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 OTUD7BQ6GQQ9 843 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 SENP2Q9HC62 589 aa17.55■□□□□ 0.4
DDX49-204ENST00000595858 PDHXO00330 501 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 ANP32AP39687 249 aaKnown RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 RUFY3Q7L099 469 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 CYP46A1Q9Y6A2 500 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 THSD7BQ9C0I4 1608 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 HOXA7P31268 230 aaPredicted RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 MAP2K1Q02750 393 aaPredicted RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 TMTC2Q8N394 836 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 PNMA1Q8ND90 353 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 UPF3BQ9BZI7 483 aaKnown RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 ZCCHC17Q9NP64 241 aaKnown RBP17.54■□□□□ 0.4
DDX49-204ENST00000595858 SLC45A1Q9Y2W3 748 aa17.54■□□□□ 0.4
DDX49-204ENST00000595858 WDR46O15213 610 aaKnown RBP17.53■□□□□ 0.4
DDX49-204ENST00000595858 LIFRP42702 1097 aa17.53■□□□□ 0.4
DDX49-204ENST00000595858 JMYQ8N9B5 988 aa17.53■□□□□ 0.4
DDX49-204ENST00000595858 RPAP3Q9H6T3 665 aaPredicted RBP17.53■□□□□ 0.4
DDX49-204ENST00000595858 MTMR7Q9Y216 660 aa17.53■□□□□ 0.4
DDX49-204ENST00000595858 USP17L15C9J2P7 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L13C9JLJ4 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L11C9JVI0 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L18D6R9N7 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 ALDH1A1P00352 501 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 PABPC4Q13310 644 aaKnown RBP eCLIP17.52■□□□□ 0.44e-8■■■■■ 37.5
DDX49-204ENST00000595858 CATSPERGQ6ZRH7 1159 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 GMCL1Q96IK5 515 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 NUP88Q99567 741 aaPredicted RBP17.52■□□□□ 0.4
DDX49-204ENST00000595858 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
DDX49-204ENST00000595858 SLC1A4P43007 532 aa17.52■□□□□ 0.39
DDX49-204ENST00000595858 FAM83BQ5T0W9 1011 aa17.52■□□□□ 0.39
DDX49-204ENST00000595858 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.39
DDX49-204ENST00000595858 RNF186Q9NXI6 227 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms